Cololabis saira (Pacific saury): 133448982
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Entry
133448982 CDS
T09849
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133448982 (traip)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133448982 (traip)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133448982 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-C3HC4_4
COG3_N
zf-RING_Vps41
HIP1_clath_bdg
AAA_13
RING_XB3-XBAT31
zf-RING_16
zf-RING-like
Zn_ribbon_8
KxDL
USP8_interact
CENP-F_leu_zip
Lzipper-MIP1
zf_RING_Vps8
Crescentin
Gp58
RINGv
Aminoglyc_resit
HhH-GPD
HSCB_C
zf-Nse
FANCL_C
SLX1_C
APG6_N
SHE3
BRISC_FAM175B_helical
ArAE_2_N
CALCOCO1
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
133448982
NCBI-ProteinID:
XP_061584009
LinkDB
All DBs
Position
8:43086617..43100517
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AA seq
456 aa
AA seq
DB search
MPIRAYCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIS
KLFFDVNADEEGPVDAESLQNELDRVRALLSTKERDWRDKQKVIDGLKDTVDKQRNDLDR
VRKETSEKEMLCSALKKQMTYLETQQNDVQAAKDEVRRLRMKMKTFESLEVLLQGRRAEV
ESMITDMGVSQAAVEQLSIYCISLKKEYDNLKGTLKSSNELCEKLKREVLSSNGKLQKAT
VETNQSKEDMKSLQKDLANADREISSLKKKVELLQKTLVTPTRTNEALSRLIFESPAPAN
LTQPRLHQPADSEGIDLNVTYDVSTPVNACKRRGPAPSKKMCLDPPATSGSKPAEKSSSL
SKARDEDPAMDSFLRNSLLFRKKTFGTMLDPHRKPGTVRTGYDGLGGRTKFIQPSPLSEI
RPLIKAKRKKVARPPSKGTTCLTLDGFLGRSDLCGE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcgagcatactgcaccatctgctcggatttctttgaccactccagagatgtt
gcagccatccactgtggacacacgtttcactatgagtgtcttcttcagtggtttcagaca
gcaccaacgaaaacctgtccacagtgcaggaaacaggtcagcaccaggcacatcatcagc
aagctgttttttgacgttaatgcggacgaggaaggtccagtggacgcagaaagcctgcag
aatgagcttgatcgagtgagagcacttctgagcaccaaagagagagactggcgagacaaa
cagaaagtgattgacggcttaaaggacacggtggacaagcagaggaacgacctggaccgt
gtgcggaaagagacatcggagaaggagatgctatgttccgcccttaaaaagcagatgacg
tatttggagacgcaacagaacgacgttcaggctgcaaaggatgaggtccggagactgagg
atgaaaatgaaaacttttgaaagcctggaggtgttgctgcagggccggagagcagaggtg
gagtccatgatcacagacatgggggtgagccaggcggccgtggagcagctttccatctac
tgcatctctctgaaaaaagagtacgataacctcaaggggaccctgaagtcttcaaatgag
ctgtgtgagaagctgaagagggaagttctctcctcaaacggcaagctgcaaaaagctaca
gtggagacgaatcagagcaaagaggacatgaagtctctgcagaaagacctggccaacgct
gacagagagatctcgagcctgaagaagaaagtggagttactccagaagactttggtcacc
ccgacccggacaaacgaagccctcagtcggctcatctttgaaagcccggcgccggccaac
ctgacgcagcctcgcctccaccagcccgcagacagcgagggcatcgacctgaacgtcacc
tacgacgtctccaccccggttaacgcgtgtaagagacgggggccggccccgtccaagaag
atgtgtctggacccgccggccacatctgggtccaaacctgcagagaaatcttcatctttg
agcaaggctcgggatgaagatccagccatggattcattcttgaggaactccctgctcttt
agaaaaaagacttttggaaccatgttggaccctcataggaagcctggaactgtcagaact
ggttatgacgggttaggaggaagaactaaattcatccaaccttctcctctgtcggagatc
cggccgctcatcaaggccaagaggaagaaggtggcgcgtcctccgtccaaaggaacgacc
tgcctgactctggacggcttcctgggccggtcggacctgtgtggagagtag
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