Cololabis saira (Pacific saury): 133448989
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Entry
133448989 CDS
T09849
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
csai04030
]
133448989
G protein-coupled receptors [BR:
csai04030
]
Rhodopsin family
Vision
Opsin
133448989
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Sru
MpPF26
7TM_GPCR_Srsx
7tm_4
DUF2975
Motif
Other DBs
NCBI-GeneID:
133448989
NCBI-ProteinID:
XP_061584019
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Position
8:complement(43321734..43323785)
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AA seq
357 aa
AA seq
DB search
MAEEWGKQSFAARRHNEDTTRGSAFSYTNSNNTRDPFEGPNYHIAPRWVYNVSTLWMCLV
VVLSVFTNGLVLVATAKFKKLQHPLNWILVNLAVADLGETVFASTISVCNQFFGYFILGH
PMCVFEGFTVSTCGIAALWSLTIISWERWVVVCKPFGNVKFDAKWATGGIVFSWIWSAAW
CAPPVFGWSRYWPHGLKTSCGPDVFSGSEDPGVLSYMIVLMITCCIIPLAIIILCYLAVW
LAIRAVAMQQKESESTQKAEREVSRMVVVMIVAYIVCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPVIYVFMNRQFRTCILQLFGKQVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagtgggggaaacaaagttttgctgccaggcggcacaatgaagatacaaca
aggggctctgccttctcctacacaaacagcaataatactcgagatccctttgagggaccc
aactaccacatcgctccacgatgggtttacaacgtttccacactttggatgtgtctagta
gttgttttgtcagtcttcaccaatggtctggtcttggtggccacagcaaagttcaagaag
ctccaacaccctctgaactggatcttggtcaatcttgccgtagctgaccttggagagacg
gttttcgccagcaccatcagtgtgtgcaaccagttctttggatatttcattctgggacat
ccaatgtgcgtctttgaaggcttcactgtctcaacttgtggtattgctgctctttggtcc
ctgactatcatctcttgggagagatgggtagtcgtgtgcaaaccttttggaaatgtcaag
tttgatgccaaatgggccacaggtggaattgtgttctcctggatctggtctgcagcatgg
tgtgctcctcccgtcttcggatggagcaggtactggcctcatggactgaagacttcctgt
ggacctgacgtgttcagtggaagtgaagaccctggagtcctgtcctacatgattgttctc
atgattacatgttgtatcattcccctggctatcatcatcttgtgctaccttgctgtgtgg
ttggccatccgtgctgttgctatgcagcagaaggagtctgagtcaacccagaaagctgag
agagaagtatccaggatggttgtcgtcatgatcgtggcgtatatcgtgtgctggggacct
tacaccttctttgcctgctttgctgcggccaaccctggatacgccttccatcctctggct
gcagccatgcctgcatactttgcaaagagcgccaccatctacaacccagtcatctatgtc
ttcatgaaccgacagttccgcacgtgcatcctgcagctctttggtaaacaggtggatgat
ggctctgaagtgtccacttccaagacagaagtctcctctgtggctcctgcataa
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