Cololabis saira (Pacific saury): 133448996
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Entry
133448996 CDS
T09849
Symbol
top1a
Name
(RefSeq) DNA topoisomerase I, like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133448996 (top1a)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
133448996 (top1a)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Topoisomerases
133448996 (top1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
133448996
NCBI-ProteinID:
XP_061584031
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Position
8:complement(43542196..43557381)
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AA seq
744 aa
AA seq
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MSGGDDQTDCGPRVNDSHKHKDKYKEREHKHKDHKKDKERDKSKHGSSDHKDSSDKKHKD
KDKMKHNDGSKDKHKEKRKDEKMKSFDGKVKKEKENGFASPLHVKSEPDNDFYHTPKHER
TLKRERDEDYDAEFKPKKIKTENDQKAKKRKQGDEDTKSKKTKIKKEGDGKKKAKKEPEE
KWKWWEEERSTDGSKWKFLEHKGPVFAPPYEPLPSNVKFYYDGKHMKLSPEAEEVATFFG
KMLEHEYTTKDIFRKNFFKDWRKEMTSEEKGKITDLKKCDFTEMNEYFKAQSEARKALSK
EEKLKIKAENERLLQEYGFCIMDNHKERIANFRIEPPGLFRGRGDHPKMGMLKRRIRPQD
IIINCSKDSKYPPPPPGTKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDW
QKYETARRLKKCVDRIRTQYREDWKSKEMRIRQRAVALYFIDKLALRAGNEKEEGETADT
VGCCSVRVEHIKLYPENEGQEFVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKEPD
DDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLKELTTADENIPAKILSYNR
ANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAKKDQLCDAKRELKSSKADAKVRRDEKSK
KAVESKRKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKKWGIPIE
KIYNKTQREKFAWAIDMADEDYQF
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggggcgatgaccagactgactgcggtccccgggtgaacgactctcacaagcat
aaagacaagtacaaagagagagaacataaacacaaggaccacaagaaggacaaagaacga
gataaatcaaagcatggcagcagcgatcacaaagactcctctgacaaaaaacacaaagac
aaggacaagatgaagcacaatgatggcagtaaagacaagcacaaagagaagaggaaagat
gagaagatgaagtcgtttgatggtaaggtcaaaaaagaaaaggagaacggctttgccagc
cctttgcatgtaaaatctgagcctgacaatgatttttaccacactcccaaacacgagagg
actctaaaaagagaacgagatgaggattatgatgcggaattcaaacccaagaaaattaag
actgaaaatgaccagaaggccaagaaaaggaaacaaggtgatgaggacaccaagtccaaa
aaaacaaaaataaaaaaagaaggcgatgggaaaaagaaggcaaagaaagaaccagaagag
aagtggaaatggtgggaagaggaacgatccacagacggtagcaaatggaaattccttgaa
cacaaaggtcctgtgtttgcgccaccatatgaacctcttcctagcaatgtaaaattttat
tatgacggtaaacatatgaagctcagtccagaggctgaagaggtggccacattctttggc
aaaatgctggagcacgagtacaccacaaaggatatctttcgtaaaaatttctttaaagat
tggagaaaggagatgacttcagaagaaaagggaaagatcacagacctgaaaaagtgtgac
ttcacagagatgaacgagtacttcaaggcgcagtctgaagcccggaaagccttgtcaaag
gaagagaaactgaaaataaaagcggagaacgagcggctcttgcaggaatacggcttctgc
atcatggacaaccacaaagaacgcattgctaacttccgtattgagcctcctggcttattt
cgtggtcgcggggaccaccccaagatgggaatgctcaaacgtcgcattagaccacaagat
attatcatcaattgcagcaaggactccaagtatccaccgcctcctcccggcaccaagtgg
aaagaggttcgtcatgacaacaaggtgacctggctggtgtcgtggacggagaacattcaa
ggctccatcaaatacattatgctgaacccgagctccagaatcaagggagagaaggactgg
cagaagtatgagacggctcgtcggctgaagaaatgtgtggaccgtatcagaacacaatac
cgtgaagattggaagtccaaggagatgaggatccggcagagggctgtagcactctatttc
attgacaagctggctctcagggcaggaaatgagaaggaagaaggagagactgcagacacg
gtcggctgctgctcggtcagagttgaacacatcaaactgtatccagagaacgagggccag
gagttcgtggtggagtttgacttcctcggtaaagactcgatccgctactacaacaaagtt
cccgtggagaaaagggtgtttaagaatctgcagttgttcatggagaacaaagaacctgat
gatgacctgttcgatcgtctgaatacctctattctgaacaagcatcttcaggagctgatg
gatggtctaactgccaaagttttccgtacatacaacgcctcaatcaccctgcagcagcag
ctaaaggaactcacaactgcggatgaaaacattccagccaagatcttgtcctacaacagg
gccaacagggctgtggccatcctgtgtaaccatcagagagctccacccaagacctttgag
aaatctatgcagaacctgcagacaaagattgacgctaaaaaggaccagctctgcgatgcc
aagagagaactgaagagttccaaggccgatgccaaagtacggagagatgaaaaatccaag
aaggcggttgagagcaagaggaaagcggtccagaggatagaggagcagctgatgaagctg
gaggtccaggccactgatcgtgaagagaacaagcagattgctctcggcacttccaaacta
aattatttggacccgcgcatttctgtggcttggtgtaagaagtggggcattcccatcgag
aagatctacaacaaaacccagcgggagaagtttgcctgggccatcgacatggcagatgag
gactatcaattttaa
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