Cololabis saira (Pacific saury): 133448997
Help
Entry
133448997 CDS
T09849
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04217
Necroptosis
csai04622
RIG-I-like receptor signaling pathway
csai04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133448997 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
133448997 (cyldb)
04625 C-type lectin receptor signaling pathway
133448997 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133448997 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133448997 (cyldb)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133448997 (cyldb)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C67
133448997 (cyldb)
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133448997 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
133448997
NCBI-ProteinID:
XP_061584032
LinkDB
All DBs
Position
8:complement(43560914..43570056)
Genome browser
AA seq
709 aa
AA seq
DB search
MEPQTVVGEKFFIVIRGKSRKGFSRGCIGRAEAETQRGELTGPLYGGGPAGAGAPKSGGA
VRREDTYPLTRHQAQLLLFVANSSKRLELLCNPQLFSAICELSRDDLVLVRHKKGHVPGL
VKNLMQVGRKDSQADLLMLGFEVEFVEDGQNLSSKKPAPLPVFSAADIVQVVPSHNVPLG
VHWRDGKSEGLNRKAVTRIHSMPSIGSRARKAAESRVIQHPRLDEVRERLEVGSMVEVES
NTGIIVYGVIRWMGVPRGKTDQWAGIELDYEVNGCSDGKYGGQRLFTCRGNRALFVPVTK
CSADSRFPCSSTDTEPLRAPETPPVLPFEDSDRDAPPVPESEATSLLVGRMKGIQGHINS
CYLDAALFSLFGSSVTVDAICQKPADTERPLTCTLRTIINRLRRHGFVPAECVMNFRRQL
GCDSFRTDEKDPEEFITVLFQKVLCIEPLLKLRSEGETSQGTYTLQIFLEKEQIGQMPTV
QQLLDASCLTGNLKFEAVPSCLIVQMPRFGNKYKMFSHIIPSTELDITDLLYNSPRECFV
CGRLAEFECVQCLPDQRLQPGRIKQYCTTCNTQVHTHPSRGSHAARALAAPADAAAVAPV
SRQALQLFAVLCIHTSHYVSFVKYGSDPHSWLFFDSMADRCGDDQTGYNIPEIRACPEVG
DFLCRREEGPARADPLQAPELVRRLLCDSYMFLYQNPATPLSRPDPGEP
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggagccccaaactgtggtgggtgagaagtttttcatcgtgatccgcgggaagtcgagg
aagggctttagccgcggctgcatcgggcgcgccgaggcggagacgcagcgcggggagctg
acggggccgctgtacggcgggggccccgcgggggcgggggcccccaagagcgggggcgcg
gtgcgcagggaggacacctacccgctcacccggcaccaggctcagctgctgctcttcgtg
gccaacagcagcaagcggctggagctgctgtgcaacccgcagctcttctccgccatctgc
gagctgtcccgggacgacctggtgctggtgcggcacaagaagggccacgtccccggcctg
gtcaagaacctcatgcaggtcgggaggaaggacagccaggctgacctgctcatgctcggg
tttgaggtggagtttgtggaagatggtcagaacttgtcatccaagaaacctgcccccctg
cctgttttcagcgcagcagacatcgtccaggtcgtcccatcccacaacgtcccgctgggg
gtgcactggcgagacggcaagtctgagggtctgaacaggaaggcggtgacacggatccat
tccatgcccagtattggatctcgtgcacggaaagccgcagagagccgagtcattcagcac
ccacgcttggacgaagtgcgtgagcgtctggaggtgggatccatggtggaggtggagtcc
aacacggggatcatagtgtacggggtcatccgctggatgggggtcccgagagggaagacg
gaccagtgggccgggattgaactggactatgaggtgaacgggtgctctgatgggaagtat
ggagggcagaggctcttcacctgcagggggaacagggctttgtttgttcccgtcacaaag
tgcagcgccgacagcaggtttccctgttcgtccacagacacggagcccctccgggcacct
gagacgcccccagtccttccatttgaagactcggacagggatgcccccccggtccccgag
tcagaggccacgtcgttgttggtggggaggatgaaggggatacagggtcacattaattct
tgctacctggatgcagctctcttcagtttgttcggttcgtctgtgactgtggacgctatc
tgccagaagcctgctgacacggagcgtcctctgacctgcactctgagaaccataataaat
cgcttacgcagacacgggttcgtgcccgcagagtgtgtgatgaattttcgcagacagctt
ggctgcgacagcttccggacggatgaaaaagacccggaggagttcatcacagtcctgttt
cagaaggtgctctgcatcgagccgctgctcaagctcaggtcggaaggagaaacctcccag
ggtacctacacgctccagatctttctggaaaaagagcagataggacagatgcccacggtg
cagcagctgctggacgcgtcctgcctcaccggcaatcttaaatttgaagcggtaccttcc
tgtctaatagttcagatgccaagatttggaaacaagtataagatgttttcccacatcatt
cccagcacggagctggacatcacggaccttctgtacaactctccaagggagtgcttcgtg
tgtggccggttggcagagtttgagtgtgttcagtgcttgccagatcagagactgcaacca
gggaggatcaaacagtactgcaccacctgtaacacacaggtgcacacccatccgtcgcgc
ggcagccacgcggcccgtgctctagcggctccggcggacgccgccgctgtcgctcccgtg
tccagacaggccctgcagctgttcgccgtgctctgcattcacaccagtcactacgtttcc
ttcgtcaaatacggctctgaccctcactcgtggctcttctttgacagcatggcagataga
tgtggcgacgatcaaactggctacaacattcctgagatccgggcctgtcccgaggtcggg
gacttcctgtgccggcgcgaggaggggccggcccgggcggaccctctccaagctcccgag
ctggtgcggcggctgctctgtgactcctacatgtttttataccagaacccggcgacgccg
ctttccaggcccgaccctggagaaccctaa
DBGET
integrated database retrieval system
