Cololabis saira (Pacific saury): 133449006
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Entry
133449006 CDS
T09849
Symbol
trpc4apa
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein a isoform X1
KO
K11796
Trpc4-associated protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133449006 (trpc4apa)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133449006 (trpc4apa)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133449006 (trpc4apa)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
133449006 (trpc4apa)
BRITE hierarchy
Motif
Pfam:
DUF3689
Translin
DUF3348
Motif
Other DBs
NCBI-GeneID:
133449006
NCBI-ProteinID:
XP_061584064
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All DBs
Position
8:complement(43630804..43652230)
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AA seq
769 aa
AA seq
DB search
MATLVGSAVKPAPRGSNLASQLAASRVSGRGFSRGTQLPGGLLQERDKRAKWHGIPILLQ
KLFESSHPNSDLSHAHSFLKVLSSQLSMEAMTFVTEDRKTPQESTFPNTYTFDLFGGVDL
LVEILMRPTLTMQKKKPKMNDDLVKDCLSVLYNCCICTEGVTKSLAARDDFVLFLFTLMT
NKKTFLQTATLIEDILGVKKEMIQLEGIPNLSGLVQSFDQQQLANFCRILSVTISEPDVG
NDDKHTLLAKNAQQKRNASPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGANFLQEL
EDWYTWLDNALVLDALMQMATEEAEQSSTESSDESSLATSPLRHRLPQSMKIVHEIMYKV
EVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKYTASNHVVHGQNENCDCS
PEISFKIQFLRLLQSFSDHHENKYLLLNSQELNELSAISMKANIPEVEALINTDRSLVCD
GKKGLLTRLLTVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHILFCII
DSGCTSRDVLQSYFDLLGELMKFNIDAFKRFNSYVNTPEKFQAFLTQINSSLVDSNMLVR
CIVLSLDRFESQTEDVKVVEVLSECSLLSYMARVENRLSFLFRLINIINVQTLTQENVSC
LNTSLVILMLARRKAKLPFYLNALREKEYTEKYPGCLLNNFHNLLRFWQRHYLNKDKDST
CLENSSCIPFSYWKETVSVLLGSDRTSLCAIVSYIDEPFVDLDRDLLED
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctggtggggtccgcggtgaaaccagccccccgcggcagcaacctggccagc
cagctggcggccagccgggtgagcggccggggcttcagcagagggacccagctcccagga
ggccttctccaggagagagacaagcgcgccaagtggcacggcatccccattttacttcag
aagctgtttgagagcagccatcccaacagtgacctctcccacgcccacagctttctcaag
gttttatcatcccagctctccatggaggccatgacgtttgtcacagaggacaggaagacg
ccgcaggagtccaccttccccaacacctacacctttgatctgtttggtggagttgacctg
cttgtggagatcctgatgagacccacgttaactatgcagaagaaaaagcccaaaatgaat
gatgacttggtcaaagactgccttagtgtcctgtacaactgttgtatatgtactgaggga
gtgacaaagagcctggcagcgagagacgactttgtcctgtttctcttcaccctgatgacg
aacaagaagaccttcctgcagacggcgactctaatcgaagatattctgggagtcaaaaag
gagatgatccagttggagggcatccccaacctgtcgggcctggtgcaaagcttcgaccag
cagcagctggccaacttctgccgcatcctgtccgtcaccatatcagagccggacgtgggg
aatgatgacaagcacactctgctggccaaaaacgcccaacagaagcgaaacgccagcccc
tcacgagctgaggtcaaccaggtgaccctcctgaacatccctggcttcatcgagcggctc
tgtaagctggccaccaggaaagtgtctgaggctacaggagccaacttcctgcaggagctg
gaggactggtacacgtggctggacaacgccctggtgctggacgccctcatgcagatggct
acggaggaggctgagcagagcagcactgagtcgtcagatgaaagctctctggccaccagc
cctctgaggcaccggctgcctcagtccatgaagattgtccatgagatcatgtacaaggtg
gaagtgctgtacgtgctctgtgtcctcctcatgggccggcagaggaaccaggttcacaaa
atgctggcggagttccgtctgatcccggggctaaataacctgtttgacaaactcatctgg
aggaaatacaccgcttcaaatcacgtggtgcacggccagaacgagaactgcgactgcagt
ccagaaatatccttcaaaatccagttcttgcgactactgcaaagtttcagtgaccaccat
gagaacaaatatctgctcctcaatagccaggagctgaatgaactgagtgccatatccatg
aaggccaacatcccggaggtggaagctctgatcaacacggacaggagcttagtttgtgac
gggaagaagggcctgctcacacggctcctcaccgtcatgaagagggagcccccagactca
tcttttaggttctggcaggctcgagcagtggagagtttcctgagaggagccacgtcctac
gcagatcagatgttcctgctcaagaggggtctattagagcacatcctgttctgcatcata
gacagcggctgtacgtctcgagacgttctgcagagctacttcgatctgctcggagagctc
atgaagttcaacatcgacgccttcaaaagattcaacagttacgtcaacactcctgagaag
ttccaggccttcctgacgcagatcaacagctctctggtggactccaacatgctggtgcgc
tgcatcgtcctgtctctggaccgctttgagagccagacggaggacgtcaaagtggtggag
gttctctccgagtgctccttgttgtcctacatggcccgagtggagaacaggctgtccttc
ctcttcagactcatcaacatcatcaacgtccagactctcacacaggagaacgtgagctgt
ttaaacaccagtctggtgatcttaatgctggcccggaggaaagccaagctgcccttctac
ctcaacgccctgcgggagaaggagtacacggagaagtacccgggctgcctgctcaacaac
ttccacaacctgctgcgcttctggcagcgccactacctcaacaaggacaaagatagcacg
tgtctggagaacagctcctgcatcccctttagctactggaaggagacggtgtcggtgctg
ctgggctcagacaggacttctctgtgtgccatagtgagctacattgacgagcccttcgtg
gacttggacagagacctcctggaagattga
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