Cololabis saira (Pacific saury): 133449013
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Entry
133449013 CDS
T09849
Symbol
cdh4
Name
(RefSeq) cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133449013 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133449013 (cdh4)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133449013 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
133449013
NCBI-ProteinID:
XP_061584074
LinkDB
All DBs
Position
8:44562631..44928733
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AA seq
925 aa
AA seq
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MNAGCVMLACGLLAGASWGFKTSQPPKLPCRPGFSQNFYTVIVSGDVLHGKSILKDTTLS
SERVKFQDCQRSREVGFVSSDPNFSVRPDGTVYTEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHLHSLPLTKISFEEMLSRVLDSQPRVIKFSRRHQRGSSGNGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASYHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVTAADSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTLIVQATDMEGNLNFGLSNTATALISITDINDNPPEFTVRTFSGEVPENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIINGDPTGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQADLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKMIRFEEGVPAGTTLTVFAAQ
DPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESVHVRNNMYEATFLAYDNGS
PQASGTGTLQIYLIDVNDNAPVLVPREAQVCERARPNSKVNITASDADTDPNVGPFVFEL
PPFPASVRRNWTISRLSGDYAQLRLRIPYLEAGVYEIPVIVSDSGNPPLSNRSLIRVKVC
PCDSNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKPLLID
PEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIISKPTGVRRVDERPVIAESQYP
VRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSSGDQ
DYDYLNDWGPRFKKLADLYGGGSDD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccggctgcgtgatgctggcgtgcggcttgcttgcgggcgcatcctgggggttt
aagacaagccaaccccccaaacttccttgtagacccggcttctcccagaacttctacaca
gtgatagtctcaggagatgtattgcacggcaagagcatcctcaaagataccaccctgtcc
agcgagcgtgtgaagtttcaagactgccagcgcagcagagaggtgggcttcgtaagcagc
gaccccaacttcagcgtgaggcctgatgggacggtatacactgagcaggaggtggccaac
ctgtcggagcccgttcagttcatggtcacggcgcggggtctccatgaccctcacatctgg
gagaccaccgtgaagctggcgctcgccggacacctgcattctttacctctcacaaagatc
agttttgaggagatgctctcaagagtactggactcccaacccagggttatcaagttttct
cgaagacatcagcgaggctcatctggcaacgggctgaggcgacagaagagggactgggtc
atcccgcccatcaacgtgcccgaaaactcccgaggacccttcccccacatgctcgtcagg
atccgctcggatcaggataaggacgtaggaatccgctacagcatcactggagcaggcgct
gaccagccccccagtggcatctacaacatcgaccccatcagcggcaacatgtttgtcacc
caacccctcgacagagaggagagagcgtcctaccatctccgtgcccatgcagtggacatg
aatgggaaccaggtggagaatcccatagacttgtacatctatgtgatcgacatgaacgac
aacagaccggagtttcagaaccaggtctacaacggctctgtggccgaaggctccaaacca
ggctcgtctgtgatgcaggttacagccgccgactcggatgactccactacagctaacggc
atggtgcgttatcgcatcctctcgcagacgccccacagtcccatacccaacatgttcacc
atcaacagcgagactggcgatatagtaaccgtggcagccggtctggacagagagaaagtg
tctcagtacacactcatcgtccaggccacagatatggagggaaacttgaactttggactt
tccaacacagctacagcacttatctccatcaccgacatcaacgataatcccccagagttt
accgtcaggacgttctcgggcgaggtcccagagaacaaggtgaacgtggtggtcaccaac
ctgaccgtggtggacagagaccagccccacagccccaactggaacgccgtctaccgcatc
atcaacggagaccccaccggacacttcaccatccgcaccaaccccatcaccaacgagggc
atgctgaccgtcgtcaagccggtggacttcgagatgaaccgggccttcatgctgaccgtg
gtggtgtccaaccaggcagacctggccagtggcatccagtcctccctccagtccacagca
ggagtcaccatctctgtccaggacgtgaacgagccgcccgtcttccccgtcaaccccaag
atgatccgtttcgaggagggcgtgccggcagggaccactctcaccgtgttcgccgcccaa
gaccccgaccacttcatccaccagatcgtcaggtactccaagctatcagaccctgctaac
tggctgaagatcaacaggaccaacggtcagatcaccaccatggccctgctggacagagag
tccgtgcacgtcaggaacaacatgtacgaggccacgttcctggcatacgacaatggttca
cctcaagccagtgggacgggcactctccagatctacctcatcgacgtgaacgacaacgcc
ccggtgctggtgccccgagaggcccaggtgtgcgagcgcgcacgccccaactccaaggtc
aacatcacagcttcagacgccgacaccgaccccaacgtggggcccttcgtcttcgagctg
ccgccctttcccgccagcgtccgacgcaactggaccatctccagactgagcggggactac
gctcagctgaggctgaggattccctacctggaggcgggcgtgtatgagatccctgtcatc
gtctccgactcggggaaccctcctctgtccaaccgttctctgatcagggtcaaagtgtgt
ccctgcgacagtaatggggactgcagcgccacgggggcggtggcggccgccggcctcggc
accggagccatcattgccatactcatctgcatcatcatactactcagcatggttctgctg
tttgtggtgtggatgaagcgccgggaaaaggaacggcaggcaaagccactgctaattgat
cccgaggacgacgtccgggacaacatcctcaaatatgatgaggagggaggaggagaggag
gatcaggactacgacctgagccagctgcagcagcccgagtctctggaccacatcatcagc
aagcccacgggcgtgcgcagggtggacgagcggccggtgatcgcagagtcccagtacccc
gtcaggcccagcctgccccaccccggagacatcggagacttcatcaacgatggcctgagg
gcagcagacaacgaccccaccgctccgccctacgactccctgctggtgttcgactacgag
ggcagcggctccaccgccggctccgtcagctcgctcaactccaccagctcgggggaccag
gactacgactacctcaacgactggggccctcgcttcaagaagctggccgacctgtacgga
ggcgggagcgacgactga
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