KEGG   Cololabis saira (Pacific saury): 133449026
Entry
133449026         CDS       T09849                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133449026 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133449026 (rae1)
   03036 Chromosome and associated proteins [BR:csai03036]
    133449026 (rae1)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     133449026 (rae1)
Chromosome and associated proteins [BR:csai03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133449026 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_ACSF4 NBCH_WD40 Beta-prop_HPS5 Beta-prop_SPT8 ExoI_SH3 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 133449026
NCBI-ProteinID: XP_061584095
LinkDB
Position
8:45121536..45134985
AA seq 369 aa
MSLFGTSSGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCMAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNQNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtctgttcgggaccagctccggctttgggacgggcggtacgggcgtgttcgggagc
acgaccacggacagccacaaccccatgaaggatgtggaggtgacgtcccccccagacgac
agcattagctgcatggccttcagccctcccaccatgccggggaacttcctcatcgcaggc
tcctgggctaatgatgtccggtgttgggaggtgcaggacaacggacagaccgtccccaaa
gcccagcagatgcacaccggtcccgtgttggacgtctgctggagtgatgacgggagtaaa
gtcttcactgcttcatgtgacaagacggccaagatgtgggatcttaacagcaaccaagca
atgcagattgcacagcatgatggcccaatcaaagcaattcactggataaaagccccaaac
tacagctgtatcatgacgggcagttgggataaaacactgaagttctgggacacccgttcg
cccaaccccatgatgtcgctgcagatgccggagcggtgctactgcgcagacgttgtgtac
cccatggccgtggtggccaccgctgagagaggcctcatcgtgtaccagctggagaaccag
ccgtcagagttccgcaggatagactcccctctcaagcatcagcatcgctgtgttgccata
ttcaaggacaagcagaacaaacccacaggttttgcgctgggaagcattgagggccgagtg
gccatccactacatcaatcctcccaatccagccaaagataacttcaccttcaagtgccac
cggtccaacgggaccaacaccaccactccccaggacatctacgccgttaacgccatctcc
ttccaccccgtccacggcacgctggctaccgtgggctcagacggccgcttcagtttctgg
gacaaggacgcgcgcaccaagctgaagacgtcggagcagctggaccagcccatcaccgcc
tgctgcttcaaccagaacgggaacatctttgcatacgcatccagttacgactggtccaag
ggccacgagtactacaacccccagaagaagaactacatcttcctgaggaacgcagccgag
gagctcaagccccggaacaagaaatggtga

DBGET integrated database retrieval system