Cololabis saira (Pacific saury): 133449041
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Entry
133449041 CDS
T09849
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133449041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133449041
03036 Chromosome and associated proteins [BR:
csai03036
]
133449041
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133449041
Coactivators
SAGA/TFTC/STAGA complex
133449041
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133449041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TMP_3
Motif
Other DBs
NCBI-GeneID:
133449041
NCBI-ProteinID:
XP_061584115
LinkDB
All DBs
Position
8:complement(44954607..44981054)
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AA seq
819 aa
AA seq
DB search
MEASPAGTDSSTGKALHATDSGTFLPNNHTGRVSSHPAQTLNGSPTMNCSGSAGSADGSA
VTGVSGGGGSSAAVSPGLAKALPAPTVIQSPESAAAVPPPQSQPTVALTRPPAGSGATLN
GSTTASPPGQTGACAPARLVNHGQTRPHIIKAEPPATILPPRAPPSGPPGAPQPPAMPAA
GAGGVRALTSQILAPRLPHTPPGQPSVHNIQLPPGMVLVRSENGQLLMIPQQALAQMQVQ
AQGGLAARASTPTNLPPGQAPGNTIIGRQASPGAMIRPGCPAPGPLAAAPALHRPPVLQS
SVGAMVPGVTPRTLSQTAGTTITSVTVSKETMENVKKCKNFLSTLIKLASSGKQSSETAA
VVRELVKDLLEGKLEAEEFTSRLYKELSSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQS
QLPAAAPGPVSSPVSSPSPTPTTVVLSSPARLSAAVSRPGLQPQPQLQPAGNKPAQTTPM
VLQAQQQQRAMLRPQVTSAPMMALRPQAPGPGPGRIVLGPQQLLQPAVLYVSVLVPSRPQ
GSAFAALTPAQRIKLKEAGGTFKDDDDINDVASMAGVNLSEESANILATNSGLVGAVTHS
CKDEPFLSCTMLHRRMLEIGRRYGVTELGAEVVNYVSHATEQRLQNLLEKVSLVSQQKNI
NPKEDDDHEQTSDVRAQLKFFEQLEVLEKQRKEEQEREILLKAAKSRARQEDPEQLRLKQ
KAKEMQQQELALMRQREANLTALAAIGPRKKRKNVDSPSSSASAEGSGSGSSVAGGSGSS
GSRTARQRITRVNLRDLLFCLEDERFTSRSHFLYKGFLK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggaggcatccccggccggcaccgactccagcacgggcaaagcgctccatgccactgac
agcggaactttcctccctaacaatcacacgggaagagtgagctcacacccagcacagact
ttgaatggcagcccgactatgaactgttcaggaagcgccggctccgcggacggctcggct
gtaacaggtgtctccggcggcggcggcagcagcgcggcggtgtccccggggctggccaag
gcgctgcccgctcccacggtcatccagagcccggagagcgctgcagcggtgcccccgccg
cagagccagcccacggtggctctgaccaggccgccggccggctctggggcgactctgaac
gggagcaccacagccagtccgcccgggcagacgggcgcatgcgcaccagcgcggctggtg
aaccacgggcagacgcgtccacacatcatcaaggcagagcctcccgcgacgatccttccc
cccagggccccccccagtggcccccccggggccccccagcccccagccatgccggctgca
ggtgccggcggggtccgagccctcacatcccagatcctggctcccagactcccccacacc
cccccaggacagcccagtgtgcacaacatccagctgcccccagggatggtgctggtgcgc
agcgagaacggccagctgctgatgattccccagcaggctctggcccagatgcaggtccag
gcccagggaggcctggcagcgcgggcgtccacgcccactaacctgcccccaggacaggct
ccaggaaacacaatcatcggtagacaggcgtctcctggcgcgatgatccggcccggctgt
ccggccccgggacccctggctgcagccccggccctgcacagacctccggtcctgcagagc
tccgttggggccatggtgccgggagtgacccccaggaccctcagccagacggccgggacc
accattacctcagtaaccgtgagcaaagagacgatggagaatgtgaagaaatgtaagaac
ttcctgtctacgctgatcaagctggcctccagcgggaagcagtcgtcggagacggcagcc
gtcgtgagggagctggtcaaagacctgctggagggaaagctggaagctgaagaattcacc
agcaggttgtacaaagagctcagctcctcgccccaaccgtaccttgtgcctttcctcaag
agaagcctcccagccttacgacagctcaccccagactcagcagctttcatccagcagagc
cagcttccagcggccgcccccggccccgtgtcctcccccgtctcctccccgtctcccacc
cccaccaccgtggttctgagcagcccggctcggctcagcgctgccgtcagcaggcccggg
ctccagcctcagccccagctccagcccgccgggaacaagccggcccagacaactcccatg
gttctccaggctcagcagcagcagcgggcgatgttgagacctcaggtaacctcagctccc
atgatggccctgcggcctcaggccccgggtccgggcccgggtcgcatcgtgctgggaccg
cagcagctcctgcagccagctgtgctttatgtttctgtgctagttccctcgaggccacag
ggctctgcgtttgctgccttgaccccggctcaaaggatcaagctcaaagaggccggagga
actttcaaagacgacgacgacatcaacgacgtggcgtccatggccggagtgaacctgtcg
gaggaaagcgccaacatcctggccaccaactcgggactggtgggggcggtcacgcattcc
tgcaaggacgagccgttcctgtcctgcacgatgctgcacaggaggatgctggagatcggg
aggaggtacggcgtgacggagctgggggcggaggtggtgaactacgtctctcacgccacc
gagcagcgactgcagaacctgctggagaaagtctcgctagtctcccagcagaaaaacatc
aatcccaaggaggacgacgaccacgagcagaccagcgacgtacgcgctcagctcaagttc
tttgagcagctggaagtgttggagaaacagcgtaaggaggagcaggagagagagatcctg
ctgaaggctgcaaagtctcgagctcggcaggaggatcctgagcagctgcgtctgaagcag
aaggcgaaggagatgcaacagcaggagttggctctgatgagacagagggaggccaacctg
actgctctggcagccatcggccccaggaagaagaggaagaatgtggattctccatcctcc
tctgcttcagctgagggctcagggagcggctcctctgtggccggtgggtcgggttcctcc
ggctccagaacggcccggcagcgcatcacacgcgtcaacctcagggacctgctcttctgt
ctggaggacgagagattcaccagccgctcacacttcctgtacaagggctttctgaaatag
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