Cololabis saira (Pacific saury): 133449062
Help
Entry
133449062 CDS
T09849
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03015
mRNA surveillance pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133449062 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
133449062 (eif4a3)
03015 mRNA surveillance pathway
133449062 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133449062 (eif4a3)
03041 Spliceosome [BR:
csai03041
]
133449062 (eif4a3)
03009 Ribosome biogenesis [BR:
csai03009
]
133449062 (eif4a3)
03012 Translation factors [BR:
csai03012
]
133449062 (eif4a3)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133449062 (eif4a3)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133449062 (eif4a3)
mRNA cycle factors
Stress granule specific factors
133449062 (eif4a3)
Spliceosome [BR:
csai03041
]
Complex C
Other components
EJC/TREX
133449062 (eif4a3)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
90S particles
Helicases
133449062 (eif4a3)
Translation factors [BR:
csai03012
]
Eukaryotic type
Initiation factors
eIF-4
133449062 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
133449062
NCBI-ProteinID:
XP_061584166
LinkDB
All DBs
Position
1:complement(56694603..56723694)
Genome browser
AA seq
406 aa
AA seq
DB search
MSAAGPQGRKRLLKDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGVYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgccgggccgcagggcaggaagaggctgctgaaggacgaggacatgaccaag
gtggagttcgagaccagcgaggaggtggacgtcacccctaccttcgacaccatgggcctg
cgggaggacctgctgcgcggcgtctacgcctacggtttcgagaagccgtcggccatccag
cagcgagccatcaagcagatcatcaagggccgggatgtcattgcccagtctcagtctgga
accggaaagaccgctaccttctgtatctcagtcctgcagtgtctcgacatccaggtgaga
gagactcaggccctgatcctcgccccgaccagagaactggccggacagatccagaaggtg
ctgctggctcttggtgactacatgaatgtccagtgtcactcctgtatcggaggcaccaac
gtgggggaggacatccgcaaactggactacggtcagcacgtggtggcggggacgcccggc
cgcgtgttcgacatgatccgccgccgcagcctcaggaccagagccatcaagatgctggtg
ctggacgaagctgacgagatgctcaacaaaggtttcaaggagcagatctacgacgtgtac
cgctacctgcccccggccacccaggtggttctgatcagcgccacgctgccccacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgacgag
ctgactctggaggggatcaagcagttcttcgtggcggtggagagagaggagtggaagttc
gacacgctgtgtgacctgtacgacaccctgaccatcacccaggccgtgatcttctgcaac
accaagaggaaggtggactggctgacggagaagatgagggaggccaacttcacggtgtcg
tccatgcacggagacatgccccagaaggagagggagtccatcatgaaggagttccgctcc
ggagccagtcgggttctgatctccaccgacgtctgggcccgaggtctggacgtcccccag
gtgtctctgatcatcaactacgacctgcccaacaacagagagctgtacatccacaggatt
ggtcggtccggtcgctacggcaggaagggcgtggccatcaactttgtgaagaacgacgac
atcaggatcctgcgggacatcgagcagtactactccacccagatcgacgagatgcccatg
aacgtggccgacctgatctga
DBGET
integrated database retrieval system
