Cololabis saira (Pacific saury): 133449080
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Entry
133449080 CDS
T09849
Symbol
nisch
Name
(RefSeq) nischarin
KO
K24095
nischarin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133449080 (nisch)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
133449080 (nisch)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
PX
LRR_9
LRR_NXF1-5
LRR_14
LRR_6
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
133449080
NCBI-ProteinID:
XP_061584195
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All DBs
Position
8:complement(1689841..1737673)
Genome browser
AA seq
1591 aa
AA seq
DB search
MEPLPFPEMEEQGSGRKVSVVGSELVENYTVYIIDVTDGQHRWTIKHRYSDFHELHEKLA
AERKVERRLLPPKKILGKNSRSLVERRQKELQLYLQTLLLQFPESTPAPLNAFLHFHLYE
INGITGALAEELFHKGEQLLQDGQVFSLRPLQLYSVSQQLRLAKPTCCNGDAKTDLGHIL
DFTCRLRYLKISGTRGPVGTSNIEERSLPFDLSVFKSLLQIEISDCSSQQIRGLSCLRSS
LVTMSVHRSTDAMMSILVPEASEFSQWEPQGAEPEGAESVCPVTAVIPLWRNLTTLDMSH
NCISTIDQSVKLIPKVEFLDLSYNQLSSVENLQHLYNLVHLDLSYNSLKVLESAHTRLGN
IKTLSLAGNQLDQLGGLGKLYSLVDLDLSHNQLEQLEEIRNIGSLPCLEKLNLSSNPMVI
IPDYRTKVLAQFGDRAAEVCLDCRATTEKELDTVEVLKAIQKAKEVKDRMSSGERKISED
TRPSAAPHLSSSSSTSSTAAAPASSSSSHPAPPAQQASSQGNQVPSFPAVRLQDWGSAKV
RERAESSPPPPPATVTTSTPPAQEEQPAVRLQETGRAGSPTRTSTSVCSVCSSSSSDPPV
PLRCSSCSSWCPLVSSRLSSLSSNQDFITQLSQRLGSAPWEGRKRREEEEEKEEKEEKEE
KEEEKELREDRSHLEDTEVDSPSSGSRDGYFEMGLDDSVEEPVGSAPTSPPVAMETAVPP
EEDEEQEEVRVSRVLWCCCVRVDLDLDQDQDQDLDQLETRVGCLVLTERLLGLLHLPPGF
TWTNQDAGGPDPDQNPGPDQRPGPALEPLLSSLQLDFLVPYSQVVPGTRAELPDSLLSLG
TRTGPTGAGPTRWYLFSQNQEIQETRTRLEELMQNQEVPSETRSSPGPPGPPPSLLHPWE
LEESRGVGGAHPALLRSPGPPSLLFLTPRHLWVLQLDLRVLAEEERSPDAPPPPQSWGRL
VRVPLGSVVLHPRVGGPCPDPQHPHRKGQALQLLLGGRRRLLLLFPLAGGAASFLGELSL
RRASLEGPRVLALPPPCCCRGDGRPRPSGSWEENQPPPHLLQGLEENQPPPHLLQGLEEN
QPPPHLLQGLEENQPPPHLLQGLEENQPPPHLLQGLEENQPPPHLLQGLEENQPPPHLLP
GLPPALRLLAGIRGKQLLKYFHKYVALSEQEQLRQVLWLSIVLYKSPETELSCCLLLSSD
AIYFLLEEPASSDLHPGLDLGDLGDLRDLGDPGDLGDPGDPGDPRDPGDSSPCLCCCLSI
RLSELLAVNVGLFDQYFRIVGSSPDLIVCCLSRDGYGTAVFLQELMAALGPHQQLPAPEP
SDQDFYSQFPHGGSGKMQNYELIHSSRVKFVYPSDEEMGDLTFIVAERRTSGAANMATAS
AANMVASPANMAVSAANMAASAAGSFNILLYLLVFQVQTPGPPGSRSGPPTRPVLEPRTL
ILTGTDIFLLDEDYVSYPLPDFAKEPPSRERYRLREARRIRDLDRVLLGYQTYPQALTLV
FDELGGPDLLCRLTLDHFGASAAAAEAQAGGGASCSPPGGGASRSPGGGDRDEVQWCVFV
PGADSRERLISLLARQWEALCSRELPVELTG
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggagccgctgcccttcccggagatggaggagcaggggtcgggcaggaaggtgtcggtg
gtcgggtccgagctggtggagaactacacggtgtacatcatcgatgtgacggacggacag
caccggtggaccatcaaacaccgctacagcgacttccacgagctccacgagaagctggcg
gcggagaggaaggtagagcggcgtcttcttcctcccaagaagatcctggggaagaattcc
cggagtctggtggagcggcggcagaaggagctgcagctttacctgcagacgctgctgctg
cagttccccgagagcacgccggctccgctcaacgccttcctgcacttccacctctacgag
atcaacggcatcaccggggcgttggctgaggaactcttccataaaggggagcagctgctg
caggacggccaggtcttctccctgcgtcccctccagctctactccgtctcccagcagctc
cgtctggccaaaccaacctgctgcaacggagacgccaagacggacctgggacacatcctg
gacttcacctgccggctgcgctatctgaagatctcggggaccagaggtccggtaggaacc
agtaacatcgaggagaggagtcttcccttcgacctgtccgtcttcaagtctctgctgcag
atagagatcagcgactgcagctcccagcagatccggggtttgtcgtgtctccggtcgtct
ctggtcaccatgagcgtccaccgctccaccgacgccatgatgtccatcctggtcccggag
gcgagtgagttctcccagtgggagccccagggggcggagcctgagggggcggagtctgtc
tgtcccgtcaccgccgtcatccctttgtggaggaacctgaccaccctggacatgagtcac
aactgtatcagcactatcgaccaatcagtgaaactgatccccaaggtggagtttctggac
ctgagctacaaccagctgagctcggtggagaacctgcagcacctgtacaacctggtccac
ctggatctttcctacaacagcctgaaggttctggagtcggctcacacccgtctgggaaac
atcaagaccctgagtctggcaggaaaccagctggaccagctgggaggactggggaagctg
tactccctggtggacctggacctgagtcacaaccagctggaacagctggaggagatcagg
aacatcggctctctgccgtgtctggagaagctcaacctgtccagcaaccccatggtcatc
atcccggactaccggaccaaagtcctggcccagtttggagaccgggcggcagaggtctgt
ctggactgcagagcaaccacggagaaggagctggacacggtggaggttctgaaggccatt
cagaaggccaaggaggtcaaggaccggatgagcagcggagaacggaagatcagtgaggac
accaggccgtctgcagctcctcacctgtcgtcctcctcctccacctcctccactgctgct
gctcctgcttcctcctcttcctcccatccggcccctccggcccagcaggcctccagccaa
ggtaaccaagttcccagcttcccggccgtgaggctgcaggactgggggtcggctaaggtc
agggaaagagccgagtcgtcgccgccccccccccctgccaccgtcaccaccagcaccccc
cccgcccaggaagaacaacctgccgtccgtctgcaggaaacaggacgagccggatctccc
accaggacttccacgtccgtctgctccgtctgctcctcttcctcctccgatcccccggta
ccgctccgctgctcctcctgctcctcctggtgtcctctggtctcctcccgtctgtcctct
ctgtcctccaaccaggacttcattacccagctgtcccagcggctcggctccgccccctgg
gaggggaggaagaggagggaggaggaggaggagaaggaggagaaggaggagaaggaggag
aaggaggaggagaaggagctgagggaggaccgatctcacctggaggacacggaggtggac
agtcccagttccgggtccagggacggctactttgagatgggtctggacgactctgtggag
gagccggtcggctccgcccccacgtcgccccccgtcgccatggagacggccgttcctcca
gaggaggacgaggagcaggaggaggtccgggtcagcagggttctgtggtgctgctgcgtc
cgcgtggacctggacctggaccaggaccaggaccaggacctggaccagctggagaccagg
gtggggtgtctggttctgacggagcggctgctgggcctgctgcaccttccgccgggcttc
acctggaccaatcaggacgcaggcggacctgacccggaccagaaccccggtccggaccag
cggcccggtccggccctggaacccctgctgtcctccctgcagctggacttcctggtcccg
tactcccaggtggtcccggggacccgggccgagctgccggactccctgctgtccctgggg
acccggaccgggcccaccggcgccgggccgacccgctggtacctgttctcccagaaccag
gagatccaggagaccagaaccagactggaggaactgatgcagaaccaggaggttccctct
gagacccggagcagccccggcccccccgggccccccccgtccctcctgcacccctgggag
ctggaggagagccggggggtggggggggcccaccctgccctcctccggtcccccggcccc
ccctccctgctcttcctcaccccccggcacctctgggtgctgcagctggacctgcgggtg
ctggcggaggaggagaggagccccgacgcccccccacccccccagtcctggggccggctg
gtccgggttcccctgggctccgtggtgctgcacccgcgggtgggggggccctgccccgac
ccccagcacccacacaggaagggccaggccctgcagctgctgctggggggaaggcgccgg
ctgctgctgctcttccccctggccggcggagccgcctccttcctgggggagctgagcctc
cgcagggcctccctggagggccccagggtgctggcgctgccgccgccctgctgctgccgg
ggcgacgggaggccccgcccctccggcagctgggaggagaaccagccgcccccccacctc
ctgcagggcctggaggagaaccagccgcccccccacctcctgcagggtctggaggagaac
cagccgcccccccacctcctgcagggcctggaggagaaccagccgcccccccacctcctg
cagggcctggaggagaaccagccgccgccccacctcctgcagggcctggaggagaaccag
ccgcccccccacctcctgcagggcctggaggagaaccagccgcccccccacctcctgccg
ggcctccccccggccctgaggctcctggccgggatcagagggaagcagctgctcaaatac
ttccacaaatacgtggctctgtcggagcaggagcagctgaggcaggtcctctggttgtcc
atcgttctctacaagtctccagaaacagaactgtcctgctgcctgctgctgtccagcgac
gccatctacttcctgctggaggaaccggcctcctcggacctgcacccagggttggacctg
ggagacctgggggacctgagagacctgggggacccgggagacctgggggacccgggagac
cccggagacccccgagaccccggggactcgtccccgtgtctctgctgctgcctgtccatc
cgcctgtcggagctgctggccgtcaacgtgggactgtttgaccagtatttcaggatcgta
ggttcctctccagacctcatcgtctgttgtctcagcagagacggttatggaactgccgtc
ttcctgcaggagctcatggcagctttgggaccgcaccagcaacttcctgccccggagccg
tcggaccaggacttctactcccagttcccccacggggggtcagggaagatgcagaactac
gagctgatccacagcagcagggtgaagttcgtttacccgagcgacgaggagatgggagac
ctgaccttcatcgtggccgagaggaggacgagcggcgccgccaacatggccaccgccagc
gccgccaacatggtcgccagccccgccaacatggccgtcagcgccgccaacatggccgcc
agcgctgccggctccttcaacatcctgctgtacctgctggtgttccaggtccagaccccc
ggccccccaggatcaaggtccggccccccgacccgcccggtcctggaaccccggaccctg
atcctcaccggcaccgacatcttcctgctggacgaggactacgtcagctacccgctgccc
gacttcgccaaggagcccccctccagggaacggtaccggctccgcgaggcccggaggatc
cgggacctggaccgggtcctgctgggctaccagacctacccccaggccctgacgctggtg
tttgacgagctggggggcccggacctgctctgccgcctcaccctggaccacttcggggct
agcgccgccgccgcggaggcccaggccgggggcggggcctcctgcagcccccccgggggc
ggggcctcccggagcccggggggcggggacagggacgaggtgcagtggtgcgtgttcgtc
cccggggccgacagcagggagcggctcatctccctcctcgcccgccagtgggaggcgctg
tgtagccgcgagctgcccgtcgagctcaccggctga
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