Cololabis saira (Pacific saury): 133449154
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Entry
133449154 CDS
T09849
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00310
Lysine degradation
csai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133449154 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133449154 (prdm2b)
03036 Chromosome and associated proteins [BR:
csai03036
]
133449154 (prdm2b)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
133449154 (prdm2b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133449154 (prdm2b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
133449154 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_jaz
zf-C2HC_2
zf-C2HE
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
133449154
NCBI-ProteinID:
XP_061584271
LinkDB
All DBs
Position
8:complement(24401820..24423781)
Genome browser
AA seq
1704 aa
AA seq
DB search
MAITGGTVETLDDIPANVWNGLPDCLHLGPSDINQSRIGVWATKIIPKGKRFGPFVGDKK
KRSQVTSNVYMWEVYFPARGWMCIDATDPMKGNWLRYVNWARSSEEQNLFPLEINRSIYY
KVLRPISAGEELLVWYTREDNPEITAALEEERASTLSRKKSPRAKRARRKLLEKARQAGL
GGFKKTSGTEQIVKEMWEGGEGVKEEEDRPLRTSQGLEDGHPYGNTDHNDVEDMSLTVMN
RVNWEEEEAEEEEEQEEEEEDSDDTREMQQQTSQELTVAETTQNKQSGPLLTCGEESHKD
SQVKLEYSLVAGEQQEVPPNVDPDAELEGEPQGESYSCPHCERHFSTRQGLERHAHIHAI
SNQQAQLFKCRYCNKSFGSQVGRRRHERRHESGFKKKPGFLAGAISVLSPVIQTDSSPDC
TTPTSHYIAIGSQFTGVHVQTPEKKELGPHADRPLTLDENGESKELHPCKYCNKAFGTHT
NMRRHQRRIHERHLLPKGVRRKGMLLQDASAQQTGAALSTSPPTVYVPSADTEDEADGDD
YAVDISKNISENLSFYIDGKIVSTSAVSGCEVIEVDSRSASLFGLDTVIISQNQINQALK
VEARTNVVKQISSGGQSASKRRTSTPPLVTSLKVETDTTPSSSSSSSSSSTSSSSKLLVG
GLFQQATDSAAFQREKPVYLSPKLKQLLQTQDFQKSTLALITDSHRLASPLSVPPLHGAS
GRYKRRTASPPSSPQLSPAGKTESCQGEGVNPLMLKVPKLESHSVPPPESMLEINDGDSL
SSPGNSAHSQASSSSGGNSCNQQPLDLSNSVSKHTDGLNRVLGDSALDLSLHRKSAVKPE
LKGNSASQSVKKKKPNTSMLEKVLMNDYVGLALPAEEGPSALTNPSGFHSRSSNTASESA
HPSPPSLTPVTMNPCSPDSCSVSSPTPPPPVLPTIPSPPAMPSSPLPSDSPAQRPLPVLS
PKMSPRSIEHKHSSDSAEDYLTEENKDEDEKQIFSSLDSLSTPLEGPPLSLTPSPPGPAA
VDLPIAEDNVSLPATCNSQLNGIVTENETSLKLESTALSSHPELLSSSAPHSPKSQESSL
SLVSQSFPQIKVKEEPQHCEDELSVTNDAPQFCPDSSPPLATPEKPSKTSEAEELDLSYC
KTFVCNVCEEPFNSIKELSAHITEHATDWPYKCEFCVQLFGDAPALLTHRTTLHGVGQIF
VCSVCSKEFAFLCNLQQHQKDLHPNETCSHTTVESGKIRPQNYTDISRAKEESSPSTPAP
ELSDENSPHPDPLLAKEEADVNGNHTEDPNEELYTTIKIMASEGGKPKGPDVRFGINQHY
PSFKPPPFPYHSRSHASSVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILAC
ANASDKKRYTPKKNPIPLKQIVKSPNGVASPTASTAGQGAFRRMGQPKRLNFNQDIGKTK
MSALSKKRNQLVQKAISQKNKAATTVKKAFVKVEEESASSVCPHCSREFTYTASLTKHMA
ISCPMKPVVTKKGKKGLAEVKKEAVSVVDKNTCRKKASDCDTQTEPEAKPLGKTRARSSG
AADPESLQASKGKTAAKMGRLKRPALYTKPVSASKKTKKGLVQPSPHTLPALAAPSDPAQ
QPAARMQRPAAGKEPALKRSTETKSPPSSQQLKKEERFSLRMRERLGGPVTRSSQMANAA
PPAELKPEEPPVQEPKESQELLMK
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggccattaccggagggacggtggagactctggatgacattccagctaatgtgtggaat
ggtttgcctgactgtctgcacctcggaccctctgatataaatcaaagccgcatcggtgtc
tgggccacaaaaataattcctaaaggcaaacgattcggtccatttgttggagacaagaaa
aaaaggtctcaggtgaccagcaatgtttacatgtgggaggtttatttcccagctcgagga
tggatgtgtattgatgccacagaccccatgaaggggaactggttaagatatgtgaactgg
gctcgttccagtgaagagcaaaatctttttccactggagatcaacagatccatttactac
aaagttttgaggccaatcagcgccggagaggagctgctggtgtggtacacacgggaagac
aacccggagataacagctgcgctggaggaagaaagagccagcactctgagcaggaaaaag
tcgcccagagccaagcgagcgaggagaaagctgctggaaaaagccagacaagctggtttg
ggtggattcaagaaaactagtggaaccgaacaaattgtgaaggagatgtgggagggtgga
gaaggtgtaaaggaggaagaagatagaccattgaggacctcgcagggactcgaggatggc
catccatatgggaacactgatcacaacgatgtggaggacatgtcattaacagtgatgaac
agagtaaactgggaggaggaggaggctgaagaggaggaggagcaagaagaagaggaggaa
gatagtgatgatacacgtgaaatgcagcaacaaacttctcaggaattaactgtagctgaa
accacgcaaaataagcagtctggcccattgctaacctgtggtgaagaaagccataaggat
tcacaggtgaagttagaatattctttggttgcaggagagcagcaagaggttccacctaat
gttgaccctgatgctgagcttgagggtgaaccacaaggagaatcatattcttgtccccac
tgtgaacgccacttttccactagacagggtcttgagcgtcatgcacacattcacgccatc
agcaaccagcaagcacaactcttcaagtgccgatactgcaataaatcctttggctcacag
gtgggacggcggcggcatgagcgaagacatgaaagtgggtttaagaaaaagcccggcttc
ctggctggggctatcagtgtactcagtcctgtgattcagactgattcgagtcctgactgc
actacccctactagtcactatatagccatagggtcccagtttacaggagtgcatgtgcaa
acccctgagaaaaaggagctgggacctcatgctgaccgtcccttaacattggatgaaaat
ggggagtcaaaagaactccatccctgcaagtactgtaataaagcatttggcacacacacc
aacatgcgcagacaccaacggagaatacacgaaaggcacttgttaccaaagggagttcgc
aggaaaggcatgctgttgcaggacgcatcagctcagcagaccggcgcggccctcagcacc
agccctcccactgtttatgtgcccagtgcagatacagaggacgaggcagatggggatgat
tatgcagttgacatatcgaaaaacatctctgaaaatctaagcttctacattgatggcaag
attgtgtccacaagcgcagtgagtggttgtgaggtgatagaggtggattcaagatctgca
tctctgtttgggttggacacagtcatcatcagtcaaaatcagatcaatcaagcactgaag
gttgaggccagaacaaacgttgtaaaacaaatctccagtggtgggcagtctgcgtccaaa
aggagaacatcgacacctcctcttgttactagtctaaaagtagagacggacacaactcca
tcatcgtcgtcatcatcatcatcatcctccacatcttcctcatcaaaattgttagtcggt
ggactatttcagcaagcaacagattcggcagcatttcagcgggagaaaccagtttacctc
tcaccgaagctcaaacagctccttcagactcaagactttcaaaaatcaaccttagctctc
ataacagacagccataggctggcttccccgctctcagtcccgccactgcacggggcttca
gggaggtataaaagaagaacagcttctcccccatcatctccccagctcagtcctgctggt
aaaactgaaagctgtcaaggtgaaggggtgaatcctctcatgcttaaggtgccaaagctt
gaaagtcacagtgtgccacctcctgagagcatgttggagataaatgatggagattctcta
agctcccctggaaattcggcccacagccaagcttcctctagtagtggaggaaactcctgt
aaccaacagcccttggatctctcaaactctgtcagtaaacataccgatggcttgaacagg
gtacttggggattcagctctggacttgagcttacatcgcaagagtgcggtcaaaccagaa
ctgaagggaaattcagcgtcccagtctgttaaaaagaaaaagcctaacaccagtatgctt
gaaaaagtgctcatgaatgattatgttggtctggccttgccagcagaagagggcccctca
gccctgacaaacccaagtggtttccattctcggtcttcaaacactgcatcagaatctgct
cacccatctccaccatctttgacccctgtcacaatgaatccctgttcccccgactcctgc
agcgtatcatctccaacacctcctcccccggtcctacctaccataccatctccaccggct
atgcctagctctcctctgccttcagactctcctgcacagagacctcttcctgtcctctct
cctaaaatgtctccaagatcaattgaacacaagcactcatcggactcggctgaggattat
ttaactgaggaaaacaaagatgaagatgagaagcaaatctttagctcactggattcctta
agtactccccttgaaggtcccccactttctttaacaccaagtcctcctgggcctgcagca
gtagatctacctattgcagaggataacgtttctctgcctgcaacttgcaacagtcagctt
aatggcattgtcacagaaaacgagacatctttgaaattggagtctactgcactctcatcc
caccctgaattattgtcttcctcagcacctcactctcctaaatcacaggagtcatctctg
tcgcttgtttcccaatcttttcctcagattaaagtgaaggaggagcctcagcactgtgaa
gacgagttatcagttacaaatgatgcgcctcagttttgtcccgactcttctccccctctc
gctactcctgaaaaaccgtctaagacctctgaggcagaggaacttgatttgtcttactgc
aagacatttgtgtgtaatgtctgcgaagagccgttcaactccattaaagagctcagcgcc
catatcacagagcacgctacagactggccctacaagtgtgaattttgcgttcagctgttt
ggcgatgcccctgctctgctgactcaccggacgactctgcacggagtgggtcagatcttt
gtatgttccgtctgttccaaagagtttgcctttctttgtaatctccagcagcaccaaaag
gatctgcatcctaacgagacatgttcacatactactgtagagagtggtaaaattaggcca
cagaattacacagatatatccagagccaaagaggaaagcagtccttcgacaccagcacca
gaactgtctgatgagaattctccacacccagaccctcttttagcaaaagaagaggcggat
gtaaatggtaatcatacagaagaccccaacgaggagttgtacactacaataaagattatg
gcctcagaaggaggaaagcctaagggcccggatgtccgatttggcatcaatcaacactat
cccagttttaaaccaccccctttcccttatcacagccgttctcatgctagctcagtggcc
tccgccacaaacttcactactcacaacataccacaaacgttcagcaccgccattcgttgc
accaagtgtggcaacagttttgacaacatgcctgaacttcacaagcatatactggcctgt
gccaatgccagcgataagaagcgttacactcccaagaaaaaccccatccccctcaaacaa
atcgtgaagagtccaaatggagtcgcgtcaccgacagcaagcactgcaggccagggtgct
ttccgtaggatgggtcagccaaagagactaaactttaatcaagatatcggtaaaacaaaa
atgagtgccctcagtaagaagagaaaccagctggtccagaaggcgatctctcagaaaaat
aaagctgccactactgtaaagaaggcttttgtcaaagtggaagaagagtcggcctctagc
gtctgtccccactgcagtcgggagttcacttacactgcaagtctgactaaacatatggca
atcagctgtcccatgaagcctgttgttactaaaaagggcaaaaaaggtctggcagaggtg
aaaaaggaggctgtttctgttgtagataaaaatacatgtagaaaaaaggcttcagactgt
gacacacaaacggagccagaggctaaacctctgggtaagaccagggctcgtagctctggt
gcagcagaccctgaatccttgcaggcaagcaaaggaaaaactgctgctaaaatgggccgg
ctaaaaaggcctgccctctacacgaaaccggtttctgctagcaaaaaaaccaagaagggt
ctagttcagccttcacctcacacccttccagccctggccgctcctagtgacccggcacag
cagcccgccgcgagaatgcagcggccagcagcgggcaaggagccagcactaaagaggtcg
acagagaccaagtcgccaccgtcatcacaacaactgaagaaggaagagcggttctccctc
cgaatgagagagaggctgggtggtccggtgaccaggagttcacagatggcaaacgcagct
cctcctgctgagctgaaacctgaggaaccaccagtgcaagagccaaaagaatctcaggag
ctgctgatgaaataa
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integrated database retrieval system
