Cololabis saira (Pacific saury): 133449158
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Entry
133449158 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133449158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133449158
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133449158
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133449158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
DZR_2
zf-RING_10
Baculo_IE-1
zf-RING_4
TRAF3_RING
NCAB1
Motif
Other DBs
NCBI-GeneID:
133449158
NCBI-ProteinID:
XP_061584275
LinkDB
All DBs
Position
8:complement(27433026..27437316)
Genome browser
AA seq
389 aa
AA seq
DB search
MSVSLAPLEPTCPDLYEDESQEGCCLTVFHFWYVNQIYKEKMKHIERKNGVKTVAQVKVT
FETDGEDGSPRKALSEFANLVRSSLAEVKSSVIPLKFVDPDQWSDAVKVIRKNENKLLLL
LSSEEVTIGGPSQSQEAFSATLNAMQKTNTSLQEYKLTPQDASLKTGTAIKHPSTGAGLT
TRESCSTRTQCPENVKEGGQQQGGSKDETCPICMDLFTNKKQLKCKHAFCEECLQSAEKF
SGPICPVCKDVFGVMIGDQPEGTMTWRRDAASLLGFEDCGHIEIAYNIPRGIQTKKHPNP
GQPYNGTARTAYLPDNKEGNKVLQLLKKAFDQRLIFTVGTSITTGIENQVTWSDISHKTF
ILGGPACFGYPDLNYIEQVKRELKAKGVE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcagtctggcacctttagagcccacttgtcctgacttgtatgaagatgagtct
caagagggttgttgcctcacagtgtttcatttctggtatgtgaaccaaatctacaaggaa
aaaatgaaacacatcgagagaaagaatggcgttaaaactgtagcacaagtcaaagtgaca
tttgaaactgatggggaagatggaagcccacgcaaggccctttctgagtttgcgaacctg
gtccggagtagcttggctgaagtcaaaagctcagtcattccactcaagttcgtagatcca
gatcagtggagcgatgcagtgaaagtcattcgaaaaaacgagaacaagcttttgcttctt
ctgtcttcagaggaagttaccataggcgggccaagccaaagtcaagaagccttcagtgca
accttaaatgcaatgcagaaaacaaatacctctttgcaagagtataaacttacacctcaa
gatgcatcactgaagacaggcacagccatcaaacacccttccactggtgcaggactgacc
acgcgggagagctgctcgactcgtacacaatgcccagaaaatgtcaaggaggggggtcaa
cagcaaggggggagcaaagatgaaacctgccctatatgcatggatctgtttaccaataag
aaacaactgaagtgtaaacatgcgttttgtgaggaatgcctgcaaagcgcagagaaattc
agcggacccatctgtcctgtttgcaaagacgtgtttggtgtgatgattggagaccagccg
gagggaacgatgacatggagaagagatgctgcatctcttcttggattcgaagactgcggt
cacatagaaatcgcctacaatattccacgtggaatacaaacgaaaaagcatcccaacccg
ggacagccctacaacggcactgccaggacggcatatctcccagacaataaagaaggcaac
aaagtgcttcaactgttgaagaaagcgtttgaccagaggctgattttcacagttgggaca
tccataacaactggtattgagaaccaagtgacctggagtgacatttcccacaagacgttc
atattaggaggaccggcgtgttttggatatcctgacctgaactatatagaacaagtcaag
agggagctgaaggccaagggtgttgagtga
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