Cololabis saira (Pacific saury): 133449159
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Entry
133449159 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133449159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133449159
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133449159
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133449159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_10
DZR_2
Baculo_IE-1
zf-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
133449159
NCBI-ProteinID:
XP_061584277
LinkDB
All DBs
Position
8:complement(27476504..27480593)
Genome browser
AA seq
437 aa
AA seq
DB search
MKRIERKNGVKTVAQVKVTFETDGEDGSPRKALSEFATLVRSSLAEVKSSVIPLKFVDPD
QWSDAVTVIRKSENKLLLLLSSEEVTIGGPSQSQEAFSATLNAMQKTNTSLQEYKLTPQD
ASLKTGPAIKDPPTGAGLTTRESCSTRTQVPTVKAQHNVDSNINQDKVDIKDSYQGPDGN
GSNSPNHQYRETTTIAKRYIQPTKSISFSGSLKHLTAGREKPSILRRYNRQTLLVPRKCP
ENVKEGGQQQGGSKDETCPICMDLFTNKKQLKCKHAFCEECLQSAEKFSGPICPVCKDVF
GVMIGDQPEGTMTWRRDAASLPGFEDCGHIEIAYNIPRGIQTKKHPNPGQPYNGTARTAY
LPDNKEGNKVLQLLKKAFDQRLIFTVGTSMTTGIENQVTWSDISHKTFILGGPACFGYPD
LNYIEQVKRELKAKGVE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatcgagagaaagaatggcgttaaaactgtagcacaagtcaaagtgacattt
gaaactgatggggaagatggaagcccacgtaaggccctttctgagtttgctaccctggtc
cggagtagcttggctgaagtcaaaagctcagtcattccactcaagttcgtagatccagat
cagtggagcgatgcagtgacagtcattcgaaaaagcgagaacaagcttttgcttcttctg
tcttcagaggaagttaccataggcgggccaagccaaagtcaagaagccttcagtgcaacc
ttaaatgcaatgcagaaaacaaatacctctttgcaagagtataaacttacacctcaagat
gcatcactgaagacaggcccagccatcaaagaccctcccactggtgcaggactgaccacg
cgggagagctgctcaactcgtacacaagtaccaacagtcaaagctcagcataatgtggac
tccaatatcaaccaagacaaagttgacattaaagattcctatcaaggtcctgatgggaat
ggctctaacagtcctaatcatcaatacagagagactaccacaatagccaagcgttacatt
cagcctaccaaatctattagttttagtggctcactgaagcatctgaccgctggaagagag
aagccgagtatacttagacggtataaccgtcaaacactgctagtccccagaaagtgccca
gaaaatgtcaaggaggggggtcaacagcaaggggggagcaaagatgaaacctgccctata
tgcatggacctgtttaccaataagaaacaactgaagtgtaaacatgcgttttgtgaggaa
tgcctgcaaagcgcagagaaattcagtggacccatctgtcctgtttgcaaagacgtgttt
ggtgtgatgattggagaccagccggagggaacgatgacatggaggagggatgctgcatct
cttcctggattcgaagactgcggtcacatagaaatcgcctacaatattccacgtggaata
caaacgaaaaagcatcccaacccgggacagccctacaacggcactgccaggacggcatat
ctcccagacaataaagaaggcaacaaagtgcttcaactgttgaagaaagcgtttgaccag
aggctgattttcacagtcgggacatccatgacaactgggattgagaaccaggtgacctgg
agtgacatttcccacaagacgttcatattaggaggaccggcgtgttttggatatcctgac
ctgaactatatagaacaagtcaagagggagctgaaggccaagggtgttgagtga
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