Cololabis saira (Pacific saury): 133449160
Help
Entry
133449160 CDS
T09849
Name
(RefSeq) uncharacterized protein LOC133449160
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133449160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133449160
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133449160
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133449160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
133449160
NCBI-ProteinID:
XP_061584278
LinkDB
All DBs
Position
8:complement(27488567..27537390)
Genome browser
AA seq
654 aa
AA seq
DB search
MAAFLGNMLGNILGKDTETPMDVDGPEVSVDGPPVSVDSPGQVATPSAKDTDEVLLYLTL
KWSESDVQKKKKTTLQKSLQNWFNNNTNKLDCEVKEVGKDGSAVIMVKPAPGVIDLQKLH
NQLLSLKDVPLVTIVSVNLAPLKPDGQTSGNASVSPRPSSVLQSGNAVLMVDHSDPASTA
DHTSDEDKKKPLYNCLIPVFQFMYMSNIYKEEIASIEKKHGVKMEAQATVTFSSDQEDGQ
QKALSEFTNLVQTRLSEVSSSVIPAKFVDSDQWISALKISQKNENKLMLTMFSEEITVFG
PTHCQEAFSSTLNATHTTNGTLEEEDPEHQDPSFKIKTTLKDRVADTGLTMEESTWKLLT
TSLTNMSYDYLETSRGPGQDTRSTQHATARSAEGATAGDSKDETCPICLDSLKMKKQLKC
KHEFCEECLKMFEKHNGPTCPVCKDVFGVMIGDQPEGTMKWKTDPASLPGFDNCGTIVIT
YRIQSGIQTEKHPNPGQWYTGTQRTAYLPDNTEGNEVLQLLKKAFDQKLIFTVGESRTTG
AENMVTWNDIQHKTNTYGGPSRYGYPDPDYLKRVKDELKAKGIISSILGQRLNVRTLSGR
PEWQHQQQQGTEENKRSERAQEQQKTAEDTMNIMHFRPSRYKTTYRLDSRKAER
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattcctggggaatatgctggggaatatcctggggaaagacacagaaacacct
atggatgtggacggcccagaggtgtcagtggacggcccaccggtgtcagtggacagccca
ggacaggttgcgacgccttcagcaaaggatacagatgaagttctactctatctcacctta
aaatggtcagagtctgatgtgcaaaaaaaaaagaaaacaactctacagaagtctctccag
aattggttcaacaacaacaccaacaaactggactgcgaagttaaagaggtcgggaaagac
gggagtgctgtgataatggttaaacctgctccaggtgtgattgatcttcagaaactgcac
aatcaacttctcagcctgaaagatgttcccctggtgaccattgtgtctgttaatctggca
ccattaaaacctgatggccaaacttcaggcaatgcttcagtgagcccccgtccttcatcg
gtgcttcaatctggtaatgctgtgctaatggtggatcatagtgatccagcttctacagca
gatcacacttctgatgaggacaaaaagaagcctctatacaattgtctcatcccagtgttt
caattcatgtatatgagcaacatctacaaggaagaaattgcaagtatagagaagaagcat
ggagttaaaatggaagcacaggccactgtgacgttttcctctgaccaggaagatggccaa
caaaaagccctttcagagttcacaaaccttgttcagacgcgcttatctgaagtcagtagc
tcagttatcccagccaagtttgtcgactcagatcagtggattagtgcactgaaaatcagt
cagaaaaatgagaacaagctcatgcttactatgttttcagaagaaattaccgtatttgga
ccaacccactgtcaagaagcattcagttcaaccttaaatgcaacgcacacaacaaatggc
actttggaggaggaagaccctgaacaccaagacccatctttcaagataaaaacgaccctc
aaagaccgtgtagctgatacagggttgaccatggaggagagcacctggaagctgctgact
acctcactgacaaacatgagttatgattatttagagacctccagaggacctgggcaggat
acgcgttcaacacagcacgctacagcacgttcagcagagggagcgacagcaggagacagt
aaagatgaaacctgccctatctgtttagattcacttaaaatgaagaaacaactgaagtgt
aaacatgagttttgtgaggaatgcctgaaaatgtttgagaaacacaacggacccacctgt
cctgtttgcaaagatgtgtttggtgtgatgattggagaccagccggagggaacgatgaaa
tggaagacagatcctgcatctcttcctggatttgacaactgtggtactatagtcatcaca
tatcggattcaaagtggaatacaaacggaaaagcatccaaatcctggacagtggtacact
ggtactcagagaactgcatatctcccagacaacacagagggcaacgaagtgctacaactg
ttgaagaaagcgtttgaccagaagctgattttcacggttggggaatccagaacgactggg
gcggagaacatggtgacctggaatgacattcaacacaaaacaaacacgtatggtggaccg
tcgagatatggataccctgacccggattatctcaaaagggtcaaggatgaactgaaggct
aaaggcattataagcagcattttgggacagaggctgaatgtaaggacgttgtcagggcga
ccagaatggcagcatcagcagcagcagggcacagaggagaacaagagatcagaaagagct
caagaacaacagaaaactgctgaagacacgatgaacataatgcacttcagaccgagtcgt
tacaaaacaacatacagacttgattctcgaaaggcagaaagataa
DBGET
integrated database retrieval system
