Cololabis saira (Pacific saury): 133449212
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Entry
133449212 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133449212
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133449212
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133449212
NCBI-ProteinID:
XP_061584328
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All DBs
Position
8:2258696..2269275
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AA seq
1134 aa
AA seq
DB search
MDQCDDGEEGVPPSKTSLCEELLSRSKAQRNRPRPGPGPGPEPGPGPGPGPGPSCVSLKS
DHSKDWFIGFKGDQQSSSERVDQQISESPSGPSVQQHQTQLDSIFQLLEDNIVMFVKNEL
KKIQRGLSPDYPESLEHLLDGEEEEQRRSREAFVKITVNFLRRMKQEELAERLQKSSFAA
VCTRRLKSKLKKKSQCVFEGIVKAGNPTLLKQIYTELYITEGGTGDVNNEHEVRQIEAAS
RKPHRAETTIRQEDIFKLPPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEGRTNQDIQ
FLFPFTFRELNVLKDRKFTLVELVHHFFTETREICIFEEFQVVFIFDGLDESRISLDFHN
NEVLTDVTESTSVDVLLTNLIRGNLLPSARLWITTRPAAANQILPECVDMVTEVRGFTNP
QKEEYFRKRFREEKSTKIISHIKTSRSLHIMCHIPVFCWITATVLENVLENVLETREGME
LPKTLTEMYIHFLVVQAKLKKVKYDGGAETDPHWSPESRKMIKSLGKLAFEQLQKGNLIF
YESDLRECGIDVREASVYSGVFTQIFREESSLYQDQVFCFIHLSVQEFLAALHVHQTFIK
SGVNLLEEQRNRWFKKRAETHLYHSAVDKALQSPNGHLDLFLRFLLGLKLETNQTLLRGL
LKPKQRRSQNNQETVEYIKEKISGYLSAEKSINLFHCLNELNDGSLVEEVQRSLGSGRLS
TGKLSPAQWSALVFILLSSEDLEVFDLKKFSASEEFLRRLLPVVQASKKVVLNDCNLSED
ICPLLSSVLSSQSSSLTELDLSNNDLQDSGLEQLCPGLESPHCHLESLRLSGCNVSGNIC
PLLSSVLSSQSSSLTELDLSNNHLQDSGLKKLFPGLESPHCHLESLRLSGCLISEEGSSS
LVSALSSNPSHLRELDLSYNHPGESAVKLLSRLEDPRWRLDTLRVEPAGQRWLTPGLRKY
SCQLTIDTNTVHKRIKLSDNNRKMMYVEEDQSYPDHPDRFDFWAQLLCREVLTGRCYWEV
QWSGGVDISVSYRRIRRKGNSVDCLFGRNDHSWSLSFYGDGRYSICHNDRGTPSSSSSSV
SGRVAVYVDVPAGTLSFYRVSSDRLILLHTFNTTFTEPLYPGFWFRSGSSVSLC
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgacgatggagaggaaggagtccctccctctaaaacctctctgtgtgag
gaacttttgagtcggagcaaagctcagaggaatagacccagacctggacctggacctgga
cctgaacccggacccggacccggacccggacccggacccagctgtgtgtccttgaagagc
gaccattcaaaggactggttcattggctttaaaggagaccagcagtcttcttcagagaga
gtggaccagcagatctcagagtcccccagcggtccgtctgtccagcagcatcagacccag
ctggactccatctttcagctgctggaggacaacattgtcatgtttgtgaagaacgagctg
aagaagatccagaggggtctgagtccagattacccagaatccctagagcatctgttggac
ggtgaggaagaagagcagagaaggagcagagaggcgtttgtgaagataacagtaaacttc
ctgaggagaatgaagcaggaggagctggctgagcgtctgcagaaaagctcttttgctgca
gtttgtacaaggcggctaaagtctaagctgaagaagaagtcccagtgtgtgtttgagggg
attgttaaagcaggaaacccaacccttctgaagcagatctacacagagctctacatcaca
gagggagggactggagacgtcaacaatgaacatgaagtcagacagattgaagcagcttcc
aggaaaccacacagagcagaaacaaccatcagacaggaagacatctttaaactcccacct
ggaagagatgaaccaatcagaacagtgatgacgaagggagtggccggcatcgggaaaaca
gtcctaacacagaagttcactctagactgggctgaaggcagaaccaaccaggacatccag
ttcctgtttccatttaccttcagagagctgaatgtgctgaaagacagaaagttcaccttg
gtggaacttgttcatcacttcttcactgaaaccagagaaatctgcatctttgaagagttc
caggtcgtgttcatctttgacggtctggatgagagtcgaatttctctggacttccacaac
aatgaggtcctgactgatgttacggagtccacctcagtggatgtgctgttgacaaacctc
atcagggggaacctgcttccttctgctcgtctctggatcaccacacggcccgcggcagcc
aatcagatccttcctgagtgtgttgacatggtgacggaggtcagagggttcactaaccca
cagaaggaggaatacttcaggaagaggttcagagaagagaagtccaccaaaatcatctcc
cacatcaagacatcacggagcctccacatcatgtgccacatcccagtcttctgctggatc
actgctacggtcctggagaacgtcctggagaatgttctggaaaccagagagggaatggag
ctgcccaagaccctgactgagatgtacatccacttcctggtggtccaggccaaactgaag
aaggtcaagtatgacggaggagctgagacggatccacactggagtccagagagcagaaag
atgatcaaatctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttc
tatgaatcagacctgagagagtgtggcatcgatgtcagagaggcttcagtgtattcagga
gtgttcacccagatctttagagaggagagcagcctgtaccaggaccaggtcttctgcttc
atccatctgagtgttcaggagtttctggctgctcttcacgtccatcagaccttcatcaag
tctggagtcaacctgctggaggaacagagaaacaggtggtttaaaaaaagagcagagact
cacctctatcatagtgctgtggacaaggccttacagagtccaaacggacacctggacttg
ttcctccgcttcctcctgggtctcaaactggagaccaatcagaccctcctacgaggtctg
ttgaaaccaaaacaaagaagatcacagaacaatcaggaaacagttgaatacatcaaggag
aagatcagtgggtatctgtctgcagagaaaagcatcaacctgttccactgtctgaatgaa
ctgaacgacggttctctggtggaggaggtccaacggtccctggggtcaggacgtctctcc
acaggtaaactttctcctgctcagtggtcggctctggtcttcatcttactgtcatcagaa
gatctggaggtgtttgacctgaagaagttctcagcttcagaggagtttctacggaggctg
ctgccggtggtccaagcctccaagaaagttgtgttgaatgactgtaacctctcagaggac
atctgtccacttctgtcctcagtcctcagctctcagtcctccagtctgacagaactggac
ctgagtaacaacgacctgcaggattcaggactggagcagctgtgtcctggactggagagt
ccacactgtcacctggagtctctcaggttgagtggttgtaatgtctcagggaacatctgt
ccacttctgtcctcagttctcagttctcagtcctccagtctgacagaactggacctgagt
aacaaccacctgcaggattcaggactgaagaagctgtttcctggactggagagtccacac
tgtcacctggagtctctcaggctgtcaggatgtctgatctcagaagaaggaagttcttct
ctggtctcagctctgagttccaacccctcccacctgagagagctggacctgagctacaac
catccaggagagtcagcagtgaaacttttgtctagactggaggatccccgctggagactg
gacactctcagggtggagcctgctggacaacgatggttgacaccaggtctgaggaagtat
tcctgtcaactcaccatcgacacaaacacggtccacaaacgcatcaaactgtctgacaac
aacaggaagatgatgtatgtggaggaggatcagtcatatcctgatcatccagacaggttt
gatttctgggctcagcttctgtgtagagaagttctgacgggtcgctgttactgggaggtc
cagtggagcggaggtgttgacatatcagtgagttacagaagaatcagaaggaaaggaaac
tctgtcgactgtttgtttggaaggaacgatcattcctggagtctgtccttttatggtgat
ggtcggtactctatctgtcacaatgacagaggaacaccttcctcctcctcttcctcagtc
tctggcagagtagcagtgtacgtggacgttcctgctggaactctgtccttctacagagtc
tcctctgacagactgatcctcctccacaccttcaacaccacattcactgaacctctctat
cctgggttctggttcaggtctggttcttcagtgtctctgtgttga
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