Cololabis saira (Pacific saury): 133449458
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Entry
133449458 CDS
T09849
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133449458 (ccdc174)
03041 Spliceosome [BR:
csai03041
]
133449458 (ccdc174)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133449458 (ccdc174)
Spliceosome [BR:
csai03041
]
Complex C
Other components
EJC/TREX
133449458 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
133449458
NCBI-ProteinID:
XP_061584594
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All DBs
Position
8:28577639..28582528
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AA seq
599 aa
AA seq
DB search
MDKKKKPLNVDASSLVDLKAELYRKQEQFKRQKLGQDDTNAGARSAVKKPSVWTKQNPGV
SARAAKDAEELSEEQVTLDTARRKLEEKARLYEQMTKGDFPDEETEKLFLVDFTQKIIDK
NRQTFTHKEMEKEDEERDGSLPIPPPQNPDEDWVDFVDALGRSRRCMKKDLPDFKKLDEN
LKGKGAASSEKSLLSEDMRRELQRQEWEREEEEAMKRPVGPIHYEDIRAQEARELGVGYF
AFSQDQGQRTKQRETLDMLRDQTTDQRAKRERLKEKRQAILKARLAKVRQRKMKKGKLDG
TDEEDNQGEEEEEEPEATGPTPDDPPEVSTLKKVDVEIQERRDTRPGVPHVREWDRGKEF
MFSEWKNRRREERDTEFAPPSAYFMNQRWKPDKSKSQNNKSSKSFNSIKVPEGISDGIAE
PEPEPQPEPQPEPQPPPVSSPPQPQPSTSLQPPDPAPVESSAPSAPHLNPQYQPPPFYPQ
FCPPPPSQFVGPPPFLPQYPPQYPPQYPPQYPPQYPPQYPPQYPPQYPPQYHPQYPHQHP
AQHPAQHPAQHPAQHPAQHPAQHPAQHPAQHPEQSQTQQQPQGAPESLDDMLSFFRNST
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaaacccttgaacgtggatgcttcatcgctcgtagatcttaaagct
gaactgtataggaaacaggagcagttcaaacggcagaaactcggtcaagatgacactaat
gctggagcgagatcagcagtcaagaagcccagcgtgtggactaagcaaaaccctggtgtt
tcagcaagagctgcaaaagatgcagaagagctgtcagaggagcaggtcaccctggacaca
gccaggcgcaagttggaggagaaggccagactctatgaacagatgacaaagggagacttt
ccagatgaagagacagagaaactcttcctcgttgacttcactcagaagattattgacaaa
aacagacaaacgtttacacacaaggagatggagaaagaggatgaggaaagagacggctca
ttacctattccacctcctcagaacccagatgaggattgggtggacttcgttgacgctttg
gggcgttctcgaagatgcatgaagaaagacttgccagattttaagaaattagatgagaac
cttaaaggaaaaggagcagcatcctctgagaagagccttctgtcagaagacatgcgtcga
gaactgcagaggcaggagtgggagcgggaggaagaagaggctatgaaaagacctgttgga
cctatccactatgaggatatcagagcacaagaggctcgggaacttggtgtgggctacttt
gctttctctcaggatcaagggcagcgcacaaagcaaagagagactttggatatgctcaga
gatcagacaacagatcagcgcgctaagagagagcgactgaaggagaaaaggcaggccatc
ctgaaggctagacttgccaaggtgaggcagaggaagatgaagaaggggaagctggatgga
actgatgaggaggacaatcaaggagaggaggaagaagaggagcctgaagcaacagggcca
acgccagatgaccccccagaggtcagcactctgaagaaggtggacgtggaaattcaggaa
aggagggacaccaggccaggagtccctcatgtcagagaatgggacaggggcaaagaattc
atgtttagtgaatggaaaaatcgccgtcgggaagagcgagatacagaatttgcacctcct
tctgcatactttatgaaccagagatggaaacccgataagtctaaaagtcagaacaataaa
tccagcaagtccttcaactcaataaaagttccagaaggaatctctgatggcatcgcagaa
cctgaacctgaacctcaacctgaacctcaacctgaacctcaacctccacctgtttcatca
ccacctcagcctcaaccttcaacatctttacagcctccagatccagcacctgtggagagc
tctgcaccttcagctcctcatttgaatccccagtatcagcctccaccattttacccacaa
ttttgtcctccgcctccctctcagtttgtaggtccacctccatttctccctcagtatcct
ccccagtatcctccccagtatcctccccagtatcctccccagtatccaccccagtatcca
ccccagtatcctccccagtatcctccccagtatcacccccagtatcctcaccagcatccc
gctcagcatcccgctcagcatcccgctcagcatcccgctcagcatcccgctcagcatccc
gctcagcatcccgctcagcatcccgctcagcatcccgagcagagtcagactcagcaacag
cctcaaggtgctcctgagagtctggacgacatgctgtccttcttcaggaattctacctaa
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