Cololabis saira (Pacific saury): 133449529
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Entry
133449529 CDS
T09849
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csai03037
]
133449529 (ift52)
Cilium and associated proteins [BR:
csai03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
133449529 (ift52)
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
MuF_C
Motif
Other DBs
NCBI-GeneID:
133449529
NCBI-ProteinID:
XP_061584673
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Position
8:complement(38249781..38256988)
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AA seq
434 aa
AA seq
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MEKDQHNTVVFSASKRELFTANNGYKSLQKRLRAQWRIQSFKEELSVEKLKGVKLWITAG
PREKFTALELEALKLYLDGGGNVLVMLGEGGEMKYDTNINFLLEEFGIIVNNDAVVRNAY
YKYFHPKEALVSDGVLNRAISRAAGKVVTGISEDENIGNNTQPLTFVYPYGATLSVIKPA
VAVLSTGSVCFPLNRPILAFYQGKQSGRLVVLGSCHMFSDQYIDKDENNKIVDVVLQWLM
TDNVQLNQIDAENPEIADYSMLPDTGCLSEQLRGCLQEGDENPRDFTSLFDMSLFNQSVD
TLPQVISTYKQLDVKNETLTLITPQFETPLPALQPAVFPPAIDDFPPLMLDLFNLDETFS
SEKVRLAQLTNKCTDEDLEFYVRKCGEILDVTPNLDKEQRDAKHILERIFFQVVEFKKLN
QEHDIDVEPQFTPS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaccaacacaatactgtcgtcttcagtgcttccaaaagagagctgtttacc
gcgaacaatggatataaatccctgcagaagaggctccgagctcagtggagaatccagagt
tttaaggaagaactctctgtggagaagttgaaaggtgtcaagttgtggatcactgctggc
ccgagggagaagttcacagcattagagctggaggctctgaagctctacctggatggaggg
ggaaatgtgctggtcatgctcggcgaaggaggggaaatgaaatatgacacgaatatcaac
tttcttctggaggagtttggaattatcgtcaacaatgatgctgttgtgaggaatgcatac
tacaaatacttccatcctaaggaggcgctggtgtctgatggtgtactaaacagagcgatc
agtcgggccgctgggaaagtggtcactggaatctctgaagatgaaaatattggaaacaat
acacagcctctaacatttgtgtacccatatggtgccacgctgagtgtgataaagcctgcc
gtggctgttctttccactggttctgtctgcttcccgctcaacaggcccatcctggccttc
taccaaggaaagcagtctggcagactggttgttttgggttcctgccacatgttcagtgat
cagtacatagacaaagatgagaacaataaaatcgtggatgttgtacttcagtggctcatg
actgataatgttcagctgaaccagattgatgcagaaaatccagagatcgcagattactcc
atgttgccagacacaggatgtttgtcagaacagctcagagggtgtttgcaagagggagat
gaaaaccccagagacttcacctccctctttgacatgtctttgttcaatcaatcagtcgac
actttacctcaagtcataagtacctataagcaacttgatgtaaaaaatgagacacttacg
ctgatcacaccccagttcgagacccctctgcctgcacttcagcctgctgtctttccacct
gccatagatgattttcctcctcttatgctggatctgttcaatctagatgaaacgttctcg
tcagagaaggtgcgcctggcacagcttaccaataaatgcactgatgaagatctggagttc
tatgtccgcaaatgtggggaaattcttgatgtgacgcccaacttggataaagagcagagg
gatgccaagcacatcttggaacgcatctttttccaggttgtagaattcaagaaactaaac
caagagcacgatattgatgtcgagccccaattcacaccatcgtga
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