Cololabis saira (Pacific saury): 133450337
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Entry
133450337 CDS
T09849
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133450337 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133450337 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
133450337 (pdlim2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
DUF7479
Motif
Other DBs
NCBI-GeneID:
133450337
NCBI-ProteinID:
XP_061584861
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All DBs
Position
9:23966214..23993123
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AA seq
369 aa
AA seq
DB search
MALTVNLIGPSPWGFRIFGGRDFKRAITVSKVNGGSKAEKADLQPGDIILEINGENTGDM
LNVEAQNKIKNSKTHLQLVVERPEPPSPGQTNGISTPEQLTGRFQEAVIVSRDENQNYRE
YTISSPASLSPGPCSPDPPGSPDRKRDGLTLTMNKNVQLRSWSPEEKGNRPSRPLSQELS
SPDFRQNSVSSRTPTPPGRYSPHSPVERDAPMSPRRSSSSSDFAMQRFDKDSEVYKMIQE
NKEYRTAPRQSNTFKMLQEVLEADEKEAAVRFPGKLSPNPPNPKPNTSVGGVTKSHTCEK
CGVNIVTQAVRIMDDHFRHPECYTCTDCGLNLRMRGHFWVGDVMYCEKHAKERYQGPGTS
PQATVSYRQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaacggtgaacctgattggcccttctccatggggtttcagaatatttggagga
agagacttcaagagggccataactgtctcaaaggtcaatggaggcagcaaggcagagaaa
gcagacctgcagcctggtgacataatcttggagatcaatggggaaaacacaggagacatg
ttgaatgtggaggcccagaacaagattaagaactccaagacccatctgcagcttgtggtg
gagagacctgaacctcccagccctgggcagactaacggcatcagcacccctgaacagctc
accggccgcttccaggaggcagtgatagtgagccgggatgagaaccagaactacagagag
tacaccatctccagccctgcatccctgtctccaggaccctgttcaccagatcctcctggc
agcccagacagaaagagggatgggctgacactgaccatgaacaagaatgtccagctgcgc
tcatggtctccagaagaaaaggggaacaggccatcgagaccgctgtctcaggagctctcc
tctccagatttccggcagaactctgtgtccagtaggaccccaactccaccgggacgctac
tcgccacatagccccgtagagcgagatgcacctatgtctcccagacgcagcagttccagc
tccgactttgccatgcagaggttcgacaaggactcggaggtgtacaagatgatccaggag
aacaaggagtaccgcacagcacctcgccagtctaacacctttaaaatgcttcaagaggtc
ctggaggctgacgaaaaagaggcagcagtgaggtttccagggaaactttcacccaacccc
ccaaacccaaaaccaaacacatcggtgggaggagtcaccaaatcccacacctgtgagaag
tgtggagtcaacattgttacacaggcggtgcgcatcatggatgaccacttccgccaccct
gagtgctacacgtgcacagattgtgggctcaacctcaggatgagaggtcacttttgggtt
ggagatgtgatgtattgtgagaagcacgccaaagagaggtaccagggccctggcacttct
cctcaagccaccgtgtcctatcgccaatga
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