Cololabis saira (Pacific saury): 133450374
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Entry
133450374 CDS
T09849
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133450374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133450374
03036 Chromosome and associated proteins [BR:
csai03036
]
133450374
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133450374
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133450374
PBAF complex
133450374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Collagen
GCN5L1
HMG_WDHD1
CENPH
Pcf11_helical
Motif
Other DBs
NCBI-GeneID:
133450374
NCBI-ProteinID:
XP_061584927
LinkDB
All DBs
Position
1:1443048..1470184
Genome browser
AA seq
442 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPTSAGFVGYNPYSHLAYNNYRLGGSQSSNSRATNSSGINIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYE
AEKIEYNESMKAYHNSPAYLAYVSAKSRAEAALEEESRQRQSRLDKGEPYVSIQPADDPD
DYDDGFSVKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEDRHQDKKRKFIEATESFNNELKRLCCMKVEVDMEKISADIAAAEEAARRRR
TEREKEEKGKDGRDGRDGRDGRDGRDGRDGRDGRDGPACVLAEEEKHVCATHGGKTLPAG
DGGNKEVEEETSTAPEKQKSSEDQDVPPGSEGPPEEKDIVPEGVMEEGTSDSNTGSETTS
AQTEDTATSEPSEGPGRARTNH
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaggccgtcctacgcccccccgcctccccccgcacccacaacccaaatgccc
accagcgccgggttcgtgggctacaacccgtacagccacctggcctacaacaactaccgg
ctgggagggagccagagcagcaacagccgggcgacgaattcctctggaatcaacatcccc
aagccgcccaagccgcccgacaagccgctgatgccgtacatgagatacagccggaaggtc
tgggaccaagtaaaagcctccaatcccgatctgaagctttgggaaattgggaagataatc
ggtggcatgtggagagacctcactgatgaggagaaacaggattatttgaatgactacgaa
gcagagaagatcgagtacaacgagagcatgaaggcgtaccacaactctccggcctacctg
gcctacgtcagcgccaagagccgcgccgaggcggcgctggaggaggagagtcgccaacgg
cagtcccggctggacaagggagagccgtacgtcagcatccagccggccgacgacccggac
gattacgacgacggtttctccgtcaaacactcggcggccgcccggttccagcggaaccac
cgcctgatcagcgagatcctgagcgagagcgtggtcccggacgtccgctccgtcgtcacc
acggcccgcatgcaggtcctcaagcgccaggtccagtccctgatggtgcaccagaggaag
ctggaggcggagcttcttcagatcgaggaccggcaccaggacaagaagaggaagttcatc
gaggccacggagtcgttcaacaacgagctgaagaggctctgctgcatgaaggtggaggtg
gacatggagaagatctcggccgacatcgccgcggccgaggaggcggcgcggcggcggcgg
acggagagagagaaggaggagaaggggaaggacggcagggacggcagggacggcagggac
ggcagggacggccgggacggcagggacggcagggacggcagggacggcccggcctgcgtc
ctcgctgaggaggaaaaacacgtctgtgctactcacggaggaaaaactcttcctgctgga
gacggaggaaacaaggaggtggaggaggaaaccagcaccgccccagagaagcagaaatcc
tccgaggaccaggacgttcccccggggagcgagggcccgccggaggagaaggatatcgtc
cccgagggcgtgatggaggagggaaccagcgacagcaacacgggctcggagaccacgtcg
gcccagacggaggacacggccaccagcgagccgtcggagggcccgggccgggccagaacc
aaccactga
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