Cololabis saira (Pacific saury): 133450431
Help
Entry
133450431 CDS
T09849
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04145
Phagosome
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133450431 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133450431 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133450431 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133450431 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133450431 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133450431 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133450431 (thbs4a)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Phagocytosis
Opsonins
133450431 (thbs4a)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133450431 (thbs4a)
Exosomal proteins of colorectal cancer cells
133450431 (thbs4a)
Exosomal proteins of bladder cancer cells
133450431 (thbs4a)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133450431 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
133450431
NCBI-ProteinID:
XP_061585043
LinkDB
All DBs
Position
9:28357220..28371110
Genome browser
AA seq
959 aa
AA seq
DB search
MTGMCVTAALLSLVLQQLVITVTAQGIVYDLLVSPDCLPDLLQGSLKNKGRDEAFILLSF
RLHSKAPTSLFSVVNPADNTKYLELSVQAKLSKVTVRYQKPDGRFSTTSFNHPSLADGQE
HHVMLHASGLQRGPPRLNIYVDCRLAHTLNDLPAAFGSLPPGPNKVALRTLQSSGQDKLT
DLKLVIEDTIDNVATLQDCSPDPAQSLHLLGIQGGRVVQDQTTMLELKTMLSEMNELLHK
QIKETNFLRNTIAECLACGLGGNPTNPATNVGPAPSPGQAVLQPQPLSYCPPGTCFRQDM
CVPSQSGGFQCAPCPDGYTGDGVHCDDVNECHFNPCFPGVRCVNTAPGFRCEKCPLGYIG
PEINGVGVSYAKSQKQVCEDLDECLNPPEIGGCTPNSHCYNTIGSFRCGSCQAGYSGDQV
GGCHGTRLCPNGQPNPCDINGECIVERDGSISCVCGIGWAGNGYVCGKDTDIDAYPDNKL
LCRDSNCKKDNCIFVPNSGQEDADRDGIGDACDDDADSDGIINIDDNCWLVPNVDQRNTD
KDLHGDACDNCRTIENPSQRDTDQDGLGDECDDDMDGDGLKNILDNCQQVPNPDQRDRDN
DGVGDACDSCPDMANPNQSDSDDDLVGDTCDDNIDSDGDGHQNTKDNCPTVINSSQLDTD
KDGRGDECDDDDDNDGILDEDDNCRMVPNPDQKDSNQDKVGDACEGDFDKDNVIDIIDHC
PENAEVTLTDFRAYQTVVLDPEGDSQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGV
DFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKVV
KSKTGPGEYMRNSLWHTGNTTEQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFY
EGSKLVADTGAIIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPADYEDPTKADRGG
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcatgtgtgtcacagcagcacttttgtctctggtgctgcagcagctggtgatt
actgtcacagctcagggtattgtctacgacctgctggtgtctccagactgcctgccagac
ttgctgcaaggaagcctaaagaacaaagggcgggatgaagcattcatcctcttgtccttc
aggctccacagtaaggctcccacctctctcttcagtgttgtcaacccagcagacaacacc
aagtacctggagctgagtgtgcaagccaaactgagcaaagtgactgttcgctaccagaag
cctgatggcagatttagtaccaccagcttcaaccacccgtccctggcagatggacaggaa
caccatgtcatgctacatgccagtggtctacagcgcggcccacctcgcctcaatatctat
gtggactgcaggctggctcacactttgaacgatctcccagctgcgttcgggtcacttcca
ccaggtcccaacaaggtggccctgagaaccctgcagtcaagtggacaggataaactgacg
gacttgaagctggttatagaggacaccatcgacaatgtggccactctgcaggactgcagt
ccggatccagcacagtctctgcacctgctgggtatccagggaggcagggtggtgcaagat
cagaccaccatgctggagctgaagaccatgttgtctgagatgaacgagctgctccacaag
cagattaaggagacaaatttcctgaggaataccattgcagaatgtctggcctgtggactt
gggggaaatcctaccaacccggctaccaatgtaggcccagctccaagtccaggccaggct
gtcctgcagcctcagcctctgagttactgccccccagggacctgtttcaggcaggacatg
tgtgtcccgtcacagtccgggggcttccagtgtgcaccttgtcctgatggctacacagga
gacggagttcactgtgatgatgtcaatgagtgtcatttcaatccatgtttccctggtgtc
cggtgtgtgaacactgctcctggttttcgttgtgagaaatgtccgctgggatacattgga
ccggagataaatggagttggagtgtcttatgctaaatctcagaaacaggtgtgtgaagat
ttggatgagtgtctgaatccacctgaaattggaggctgtacacccaactcacactgctac
aacactataggatccttccgctgtggttcttgtcaagctggttactcaggcgaccaggta
ggaggctgccatggcaccaggctttgccccaatggtcagcccaacccttgtgacatcaat
ggcgagtgcattgtggaaagagacggcagcattagctgtgtgtgtggcattggctgggct
ggcaatggctacgtatgcgggaaggacacagatatagatgcatatcctgacaataagctg
ctgtgcagagacagcaactgcaagaaggacaactgcatatttgtacccaactctggccaa
gaggatgcagatagggacgggattggtgatgcttgtgatgatgatgcagacagtgatggc
attattaacatagatgacaactgctggctggttcctaatgtcgaccagaggaacacagat
aaggatctccatggcgatgcctgtgataactgcaggacaattgaaaatccctcacagagg
gacacagatcaagatggtctgggagatgaatgtgatgatgacatggatggggatggcttg
aaaaatattcttgacaactgccagcaagttcccaacccagaccaaagagacagagacaat
gacggtgtgggcgacgcctgtgacagctgtcccgacatggccaaccccaaccagtctgat
tctgatgatgaccttgtaggagacacctgtgatgacaacatagacagtgatggtgatggc
caccaaaacaccaaggacaactgtcccactgtcatcaactcctcacagctggacactgac
aaggatggaaggggagatgaatgtgacgatgatgacgacaatgatggcatcctggatgaa
gatgacaactgcagaatggttccaaacccagaccaaaaggactccaaccaggacaaagtt
ggagacgcgtgtgaaggagactttgacaaagacaacgtgattgacatcatcgaccactgc
ccagagaacgctgaggtcacactgactgactttagagcctatcagaccgtggtccttgac
ccggagggagactcacaaatagaccccaactgggtggtactcaatcagggcatggagata
gtccagaccatgaactctgaccctggcctggctgttggctatacagccttcagcggagtt
gactttgagggaacgttccacgtaaacacagtgacagatgatgactatgctggcttcatt
ttcggctaccaggactcgtcctccttctacgtagtgatgtggaagcagacggagcagacc
tactggcaggcagcccccttcagagccgtcgctgagccaggaatacaactgaaggtggtg
aagtctaagacaggtcctggtgagtacatgaggaactccctctggcacacaggaaacacc
acggagcaggtgcgtctcctttggaaagatcctcggaatgtgggttggaaggacaaggtt
tcctaccgctggtttctccagcacagaccacaagtcggatacatcagggctcgcttttat
gagggctcaaaactggtggcggacacaggggcgatcattgacaccagtatgagaggcggg
cggctgggtgtgttctgcttctctcaggaaaatatcatctggtccaatctgaagtaccgc
tgcaacgacaccatccctgctgattacgaggatccgacaaaagcagacaggggaggctga
DBGET
integrated database retrieval system
