KEGG   Cololabis saira (Pacific saury): 133450442
Entry
133450442         CDS       T09849                                 
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04137  Mitophagy - animal
csai04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133450442 (vcp)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    133450442 (vcp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133450442 (vcp)
   03009 Ribosome biogenesis [BR:csai03009]
    133450442 (vcp)
   04131 Membrane trafficking [BR:csai04131]
    133450442 (vcp)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csai04147]
    133450442 (vcp)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     133450442 (vcp)
Ribosome biogenesis [BR:csai03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    133450442 (vcp)
Membrane trafficking [BR:csai04131]
 SNARE
  SNARE associated proteins
   Others
    133450442 (vcp)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    133450442 (vcp)
Exosome [BR:csai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133450442 (vcp)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 TIP49 AAA_22 AAA_14 RNA_helicase NPHP3_N Vps4_C AAA_28 nSTAND3 Parvo_NS1 Mg_chelatase AAA_17 IstB_IS21 ATPase_2 AAA_18 AAA_7 ATPase DUF815 ABC_tran AAA_24 NB-ARC TsaE ResIII Sigma54_activat NACHT SLFN-g3_helicase Viral_helicase1 KAP_NTPase Zot DUF3944
Other DBs
NCBI-GeneID: 133450442
NCBI-ProteinID: XP_061585056
LinkDB
Position
9:complement(28682713..28691049)
AA seq 806 aa
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSTAGG
SGPSHGAGGTGSSPVFNEDNDDDLYG
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcatcgggcggggaatccaaaaatgatgatctatcaactgcaattctgaagcagaag
aacagacccaacagactgattgttgatgaatccatcaatgaagacaacagtgttgtgtca
ctttctcagaccaagatggacgagttgcagctattccgtggtgacacagtgctgatgaag
gggaaaaagaggcgagagactgtgtgcattgtactgtctgatgatacctgctctgacgaa
aaggttcgcatgaacagagtggtacgcaacaatctgagggtccgtcttggtgatgtcatc
agcattcagccatgtcctgatgtgaaatatggaaagaggattcatgtcctaccaatagat
gacacagtagagggaattactggcaacctctttgaggtctacctgaagccatacttctta
gaggcatacaggccaattcgcaaaggtgatatcttcctggtcagaggaggcatgcgtgct
gtagagttcaaggtggtagagaccgatccttcaccttattgcattgttgctcctgataca
gtcattcactgtgagggagagcccatcaggagagaggatgaagaagaatccctgaacgag
gtgggctatgatgacatcggaggagttaggaagcagcttgctcagatcaaagagatggtg
gagctgcctctcagacaccctgcactatttaaggccataggagttaagcccccacgtgga
atccttctgtatggaccccctggaaccggaaaaactttgattgccagggctgtggccaat
gaaacaggagctttcttcttcctcatcaatggccctgagatcatgagtaaattggccgga
gagagcgagagtaatctgagaaaggccttcgaggaagctgagaagaatgcgcctgccatc
atctttatcgatgaacttgatgcaatcgctccaaagagagagaagactcatggagaggtg
gagaggcgcatcgtttctcagctgctcactcttatggacggcctgaaacagagagctcat
gtgatcgtcatggctgccaccaacagacccaacagcattgacccagctcttaggagattc
gggcgctttgacagggaagtggacattggcattcctgatgcaactggcaggttggagatt
ctccagattcacacaaagaacatgaaactggctgacgatgttgacttggaacaggtagcc
aatgagacccatgggcatgtgggtgcagatctggcagctctctgttctgaagctgctctg
caggccatcaggaagaagatggacctgattgaccttgaagacgagaccattgatgctgaa
gtgatgaactcactggctgttactatggatgacttcaagtgggctctaagccagagcaac
ccatcggcactgagggagacagttgttgaggttcccaacatcacctgggacgatattgga
ggtctggaagatgttaagagggagctgcaggagctggtgcagtaccctgtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaagggtgtgctattctatggtccccct
ggttgcggtaagacactactggccaaagctattgccaatgagtgccaggcgaacttcatc
tccatcaaaggacccgagctgctcaccatgtggtttggagaatctgaggccaatgtcaga
gagatctttgacaaggcgcgccaggctgccccttgtgtcctcttctttgatgagctggat
tccatagccaaggcccgtggtggcaatgtgggtgacggtggtggagctgccgaccgtgtc
atcaaccagatcctgactgagatggatggaatgtcgagcaagaaaaatgtcttcatcatt
ggggccaccaacagaccagacatcatcgatcctgccatcctgaggcctggtcgtctcgat
cagctcatctacatccccttgcctgatgagaagagcagaatcagcatcctgaaggccaat
ctccgcaagagtccaatcagcaaggatgtggacttggacttcctggctaagatgaccaat
ggcttttctggagctgatcttacagaaatctgccagcgggcgtgtaaactggcaatcaga
gagagcattgagaacgagatccgcagagagagagagaggcagaccaacccgtcagctatg
gaggtggaagaggatgatcctgttccagagatcagaaaggaccactttgaagaagcaatg
cgatttgctcgtcgctctgtcagtgacaatgacatccgcaaatatgagatgtttgctcaa
acactgcagcagagccggggctttggcagctttaggtttcctaccagtactgcaggaggc
agtggtccaagtcatggtgcaggtggaactggcagtagtccagtgttcaatgaagacaac
gatgatgatctttatggataa

DBGET integrated database retrieval system