Cololabis saira (Pacific saury): 133450442
Help
Entry
133450442 CDS
T09849
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
csai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133450442 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133450442 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133450442 (vcp)
03009 Ribosome biogenesis [BR:
csai03009
]
133450442 (vcp)
04131 Membrane trafficking [BR:
csai04131
]
133450442 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133450442 (vcp)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133450442 (vcp)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133450442 (vcp)
Membrane trafficking [BR:
csai04131
]
SNARE
SNARE associated proteins
Others
133450442 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133450442 (vcp)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133450442 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
SLFN-g3_helicase
Viral_helicase1
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
133450442
NCBI-ProteinID:
XP_061585056
LinkDB
All DBs
Position
9:complement(28682713..28691049)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSTAGG
SGPSHGAGGTGSSPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcggggaatccaaaaatgatgatctatcaactgcaattctgaagcagaag
aacagacccaacagactgattgttgatgaatccatcaatgaagacaacagtgttgtgtca
ctttctcagaccaagatggacgagttgcagctattccgtggtgacacagtgctgatgaag
gggaaaaagaggcgagagactgtgtgcattgtactgtctgatgatacctgctctgacgaa
aaggttcgcatgaacagagtggtacgcaacaatctgagggtccgtcttggtgatgtcatc
agcattcagccatgtcctgatgtgaaatatggaaagaggattcatgtcctaccaatagat
gacacagtagagggaattactggcaacctctttgaggtctacctgaagccatacttctta
gaggcatacaggccaattcgcaaaggtgatatcttcctggtcagaggaggcatgcgtgct
gtagagttcaaggtggtagagaccgatccttcaccttattgcattgttgctcctgataca
gtcattcactgtgagggagagcccatcaggagagaggatgaagaagaatccctgaacgag
gtgggctatgatgacatcggaggagttaggaagcagcttgctcagatcaaagagatggtg
gagctgcctctcagacaccctgcactatttaaggccataggagttaagcccccacgtgga
atccttctgtatggaccccctggaaccggaaaaactttgattgccagggctgtggccaat
gaaacaggagctttcttcttcctcatcaatggccctgagatcatgagtaaattggccgga
gagagcgagagtaatctgagaaaggccttcgaggaagctgagaagaatgcgcctgccatc
atctttatcgatgaacttgatgcaatcgctccaaagagagagaagactcatggagaggtg
gagaggcgcatcgtttctcagctgctcactcttatggacggcctgaaacagagagctcat
gtgatcgtcatggctgccaccaacagacccaacagcattgacccagctcttaggagattc
gggcgctttgacagggaagtggacattggcattcctgatgcaactggcaggttggagatt
ctccagattcacacaaagaacatgaaactggctgacgatgttgacttggaacaggtagcc
aatgagacccatgggcatgtgggtgcagatctggcagctctctgttctgaagctgctctg
caggccatcaggaagaagatggacctgattgaccttgaagacgagaccattgatgctgaa
gtgatgaactcactggctgttactatggatgacttcaagtgggctctaagccagagcaac
ccatcggcactgagggagacagttgttgaggttcccaacatcacctgggacgatattgga
ggtctggaagatgttaagagggagctgcaggagctggtgcagtaccctgtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaagggtgtgctattctatggtccccct
ggttgcggtaagacactactggccaaagctattgccaatgagtgccaggcgaacttcatc
tccatcaaaggacccgagctgctcaccatgtggtttggagaatctgaggccaatgtcaga
gagatctttgacaaggcgcgccaggctgccccttgtgtcctcttctttgatgagctggat
tccatagccaaggcccgtggtggcaatgtgggtgacggtggtggagctgccgaccgtgtc
atcaaccagatcctgactgagatggatggaatgtcgagcaagaaaaatgtcttcatcatt
ggggccaccaacagaccagacatcatcgatcctgccatcctgaggcctggtcgtctcgat
cagctcatctacatccccttgcctgatgagaagagcagaatcagcatcctgaaggccaat
ctccgcaagagtccaatcagcaaggatgtggacttggacttcctggctaagatgaccaat
ggcttttctggagctgatcttacagaaatctgccagcgggcgtgtaaactggcaatcaga
gagagcattgagaacgagatccgcagagagagagagaggcagaccaacccgtcagctatg
gaggtggaagaggatgatcctgttccagagatcagaaaggaccactttgaagaagcaatg
cgatttgctcgtcgctctgtcagtgacaatgacatccgcaaatatgagatgtttgctcaa
acactgcagcagagccggggctttggcagctttaggtttcctaccagtactgcaggaggc
agtggtccaagtcatggtgcaggtggaactggcagtagtccagtgttcaatgaagacaac
gatgatgatctttatggataa
DBGET
integrated database retrieval system