Cololabis saira (Pacific saury): 133450446
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Entry
133450446 CDS
T09849
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133450446 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133450446 (thoc5)
03041 Spliceosome [BR:
csai03041
]
133450446 (thoc5)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133450446 (thoc5)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133450446 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
133450446
NCBI-ProteinID:
XP_061585061
LinkDB
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Position
9:complement(28711767..28722197)
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AA seq
683 aa
AA seq
DB search
MSEALKKRKSKVLRSEGGTAEMKRGRGELEQQDVRVYNEEGELDARDPEQDYLQYKESCE
SLARLMNEIQELKANGAKEGCAEVEQRRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEAK
QKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEDIDLVSEEEFYQDAPQEISRPRLTK
NDPHQLTLARLDWELEQRMRLAEKYKESQATKEKIQKSIEVKKEHLTSLQPGLNAIMQAS
IPVQDYLSMPFEQTQKQTEVSPHLPPPLYVLFVQANAYGQACDKNLCVSISGDVDEAKAL
SKPPDDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGSM
LHLFFYYLMNLNIMTVKTKVSTNTDLTTAISAGDLLKEDTLLSCLYTNDQGRETPNPANR
YQFDKVGIISFADYVEDLGYPYMWVQNLGGLCFPSDSSEGGLVGSSLSASHMECTMKLLR
SRVLSRLALHKQFASLEHSILPVSSECQHLFPAKMISHLARWTTISQQEYMSLLYTRHVT
DAGLAKETDLYFMAVVERGTARLQAAVVLSPRYPVVSPLFSLSLSWKGECSGRTDDNLRA
MESEVNVFKNELQGPRPGHQLLTNQLLRLCVCLDVYLETEGQDDGVEGPREFPREKMCLR
TVRGPNRLKPFKYNNPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccttaaagaaacggaagtcgaaggttctccggagtgaaggaggaaccgcg
gagatgaagcgaggtcgaggggagctggagcagcaggatgtacgggtctataatgaggag
ggggagctggatgctagagaccctgagcaagactatttgcagtacaaggaatcatgtgag
agtctggccaggctcatgaatgagattcaggagctgaaagccaatggagccaaagaaggg
tgcgcagaggtcgagcagagacgtatgcagagctgcatccacttcatgaatctgaaaaaa
ctcaaccgtctggctcatatgcgactaaagagaggcagagaccagacacatgaggcaaaa
caaaaagtggatgtgctgcatcttcagttacaaaacctgctttatgaagtcatgcatctt
cagaaggaaatcagcaagtgtctagagttcaagtctaagcatgaagacatagacttggtg
agtgaagaggagttttaccaggatgccccacaggagatttctaggcctcgcctcacaaaa
aatgatcctcaccagctcacactggcccggctggactgggagcttgaacagaggatgagg
ttggcagagaaatacaaggaatcacaagcaacaaaggagaaaattcagaagagcattgag
gtgaagaaggagcatctgacaagcttgcagccaggactcaatgctatcatgcaggcatct
atcccagtgcaggattacctgtccatgccatttgaacagacccagaaacagacagaggtt
tccccccacctgcctccgcccctctatgtgctgtttgttcaagcaaatgcatatggccag
gcctgtgacaagaacctgtgtgtgtccatcagtggtgatgtggatgaggccaaggctctg
tccaaacctccagatgattcacaggatgatgagagtgattcagatgcagaagaggagcaa
gagaaaacgaagagaaggcggccaactacaggaggccagctggatgacaaacgacgagag
atgctgaaaaggcaccccctgtccttatgcttggacctcaagtgcaaagatggcagcatg
ctccatctcttcttctactacctgatgaatctgaacattatgacagtcaagaccaaggtc
tctaccaacaccgacctcaccacagccatcagcgcaggtgaccttctgaaggaagatact
ctcctcagctgtctctacactaatgatcaggggagggaaactccaaatccagctaatcgc
taccagtttgacaaagtcgggatcatttcctttgccgattatgtggaagatctgggatat
ccctacatgtgggttcaaaatcttggaggactgtgttttcctagtgactcctcagaggga
ggacttgtgggcagttccctgagtgccagtcacatggagtgcaccatgaagcttctgagg
tcacgagtcctgtcccgcttggctctgcacaaacaatttgcctctttagagcacagcatc
ctcccagtctccagtgagtgtcagcacctctttcctgccaagatgatctcccatttagca
cgctggactacaatcagccaacaggagtacatgagtcttctgtatacacgtcatgtaact
gatgctgggctagcaaaggagacggatctttactttatggcagtggtcgaaagaggcaca
gctcgcctccaggccgcagtggtgctgagtccccgttacccagtggtctctcctctgttc
tccctctccctcagctggaagggagagtgtagtgggcgcactgatgacaaccttcgagcc
atggagagtgaagttaatgtgttcaaaaatgaactacagggaccacgtcccggacaccag
ctcctcaccaatcagcttttacgtctgtgtgtctgcctggatgtgtatttggagacagaa
gggcaggatgatggcgtggaaggacctcgagagttcccccgtgaaaagatgtgcttgcgc
acagtcaggggtccaaatcgcttgaagccattcaagtacaacaaccctcagggcttcttc
agtcaccgttaa
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integrated database retrieval system
