Cololabis saira (Pacific saury): 133450462
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Entry
133450462 CDS
T09849
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03030
DNA replication
csai03410
Base excision repair
csai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133450462 (pole)
03410 Base excision repair
133450462 (pole)
03420 Nucleotide excision repair
133450462 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133450462 (pole)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133450462 (pole)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133450462 (pole)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
133450462 (pole)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
133450462 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
133450462
NCBI-ProteinID:
XP_061585095
LinkDB
All DBs
Position
9:complement(29042203..29061512)
Genome browser
AA seq
2290 aa
AA seq
DB search
MVLQNSGRYKSDRGQSGGDQENQDDSSSALKRLERSQFTDAMDARFGFDRIREPGEKTGW
LINMHPAEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYLSK
KFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFSTLEELMKVKREISPAVRKNREREQ
SNDAYTSMLSSALSGGSVTPADEDRTSKSISDQLDNIVDMREYDVPYHVRVSIDLKIHVA
HWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYQID
GQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEDDEAGLIKRWFDHVHETQPNIFVT
YNGDFFDWPFVETRAAVHGLNMYKEIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEGTMRHAIEEEEKLPLEQVTNFNEVCD
EIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
TCQRSMAWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLNREEQAKHEKK
RLADYCKKAYKKTHVTKREERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSA
AQESGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAILNILV
KEGFTNDQYHELVDPGSLTYNIRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYDSVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRKLEDYGELKSTSISTAKRLAEFLGDQMVKDKGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQPLQ
AGQAADIEDFGMPPRPLQPAILISTKRKRDSQGGDSQTASQDVELTQSWREILGPPPTRG
RTREECLVWLRYHKKKWELQLRQRKERKKRRKLMDGEAQPVGGGVIRDGPTTGLGSFLRR
TARSILDMPWQIVQIAETAHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEEGATY
KKVNRMLPRSNVVYYLYEYTVLEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCVCMVNKNGVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFG
LFIPSQRKASIFVLDTVRSNQMPNLGNLYTAERTALLEKTTDELLPPEKHTFEVRAENDM
KAISRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEISYNV
LDWQRLGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTILQ
SQHVNDMEGGASLGVSFDVIQQASLEEMMSGNQGASALASYDETALCSNTFRILKSMVVG
WVREITQFHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLGS
TVVYGNFNRIILCTKKRRINDAIAYMEYITNSIHSRELFHSLSISFSRCWEFLLWMDPAN
SGGVKGKLPSSLLSGEEGAKQKKGRQGEGDEDGSEDEDEEEDVEDDDGETDDVEELIESN
WNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRAGSQASQQPLG
DLNALPGMISFSQEYVASELTQNFFTITQKIQKKVTGSRNVTQTSEMFPVLPGSHLPLNN
PALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEESQFCDPCNSYVLPEVICH
HCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQFETESIEMALVEALQKKLMSYTLQDL
VCTKCKGVKEANMPLYCKCAGDFGLTFSTKSFSEQITVFRNIASHYNMRFLEENIDWLLV
MSPQIGQSSH
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagcggacggtataagtcggaccggggacaaagtggaggagatcag
gaaaaccaggatgattcctcctccgccctgaagcggctggagcgcagccagttcaccgac
gccatggacgcccgcttcggcttcgacaggatcagggagccgggggagaagacgggctgg
ctgatcaacatgcatcctgcagagatcttggatgaagacaagaggatgatcagtgccgtg
gactactatttcattcaggaggatggaagcagattcaaggtggctcttccattcaagcct
tatttttacattgctactaaaaagaactgtgagagggaggtcatttcatacttgtcaaag
aagttccaaggaaaggtggcaaagcttgaaatcctcccaaaagaggacctggacctgcca
aaccatctcgtgggcctgaagagaagctacatcaagctgtcgttcagcaccctggaagag
ctcatgaaagtcaagcgtgagatttctccagccgtgcgtaagaacagagagagggaacag
tccaacgatgcctacacctctatgttgtcaagtgctctttcagggggcagtgtgactcca
gcagatgaagataggacgtcaaagagtatctcagatcagttagacaacatcgtggacatg
agagagtacgatgtgccttaccacgtgcgagtgtccatagacctcaagatccatgtcgct
cactggtacaatgttcgataccgaggcagtgcttatccaccagagatcgttcggagagat
gaccttgtggagcggccggaccctgttgttttggcctttgacattgagaccaccaaactt
cctctgaaattcccggatgcagagtcagatcagataatgatgatctcctaccagatagat
ggacagggtttcctaatcacaaacagagagattgtctctgaggacattgaggattttgag
ttcactcccaaacctgaatatgaagggccttttacagttttcaatgaggatgatgaggcg
ggcctcatcaagaggtggtttgatcacgttcatgaaacccaaccaaacatctttgtaacc
tacaatggagacttttttgattggccttttgtggagaccagggctgcggttcatggacta
aacatgtacaaggagattggtttccagaaggacaaccaaggagagtacaagtccagccaa
gccatccacatggactgtctgaggtgggtaaagagagacagctacttgcctgtggggagt
cacaacctgaaggcagcagcaaaggccaagctgggctacgaccccgtggagctggacccc
gaagagatgtgccgcatggcaactgaagaaccacagaccctagcaacctactctgtgtcc
gatgccgtcgccacatattacctgtacatgaagtatgttcacccttttatcttcgcgctg
tgtaccatcatccccatggaacccgatgaggtgctgcgtaaaggttctgggactctgtgt
gaagccctgctcatggtgcaggccttccacgccaacatcatcttccccaacaagcaggag
caggtcttcaacaaacttacagacgacggtcacgtcatggactccgagacctacgtgggc
ggacacgtggaggcgctggagtcaggagtgtttcgcagtgacatcccctgtcgttttaaa
atgaacccggctgcatttgacttcctcttgcaaagagttgagggaacgatgcgtcacgcc
atcgaggaagaggagaaacttcccctggagcaagttaccaactttaatgaggtttgtgat
gaaatcaaaaagaagctgacttccttgaaggaggttccaaacaggattgaatgtcccctc
atctaccatcttgacgtcggcgcgatgtaccctaatattattctcaccaaccgtttgcag
ccatcagctatggttgatgaggccacatgtgctgcctgtgacttcaacaagcctggcgcc
acctgtcagaggagtatggcctggcagtggagaggagaaatcatgcctgcaagtcggagt
gagttccaccgcatccagcagcaactcgagtctgaaaagttcccgccgtttttccccaac
ggacctcctcgggcctttcacactctcaacagggaggagcaggccaagcatgagaagaaa
cgtctggcagactattgtaagaaggcgtataagaaaacacacgtcaccaagcgggaggag
cgggttaccaccatctgtcagagagaaaactccttttatgttgacactgtcagagctttc
agggatcgacgttacgaattcaaaggacttcacaaggtgtggaaaaagaaattgtcggca
gcccaggaaagcggagacgctgctgaggtgaagcgctgcaaaaacatggagatcctgtac
gagtctcttcagctggctcacaagtgtattctcaactccttctacggctacgtcatgagg
aaaggggcccgctggtactccatggaaatggctggtatagtgtgctttaccggagccaac
atcatcactcaggccagagagctaattgaacaaattgggaggcccctggagttggacact
gatggtatctggtgtgtcctgcccaacacctttcctgagaactttgtggtaaaaaccagc
aatgagaagaaacccaaggtgaccatttcttacccgggagcgatacttaacatcttggtg
aaagagggattcaccaacgaccagtaccatgagctggtggaccccgggtcgctaacatac
aacatcagggcggagaacagcatcttctttgaggtggacggaccgtaccttgcgatgatc
ctgcctgcttccaaagaggaaggcaagaagctgaagaagaggtacgctgtgtttaatgaa
gatggctctcttgctgagctcaaaggttttgaagtgaagagaagaggggagctccagctc
attaagattttccagtcgtctgtgtttgaggcttttctcaaaggtaccactttggaagag
gtctatgactctgtggccaaagtggccgactactggctggacgtgctttacagcaaggct
gccaacatgccggatgcagaactgtttgaactgatttcggagaatcgttcaatgtccaga
aaacttgaggactacggagagctgaagtccacgtccatcagcacagctaagagactggcc
gagttcctgggagaccagatggttaaagataaaggtctaagctgtcgttacgttatctcg
cgaaaacctgagggctcccccgtcacagaaagggccatccctctggccattttccaagca
gagcccagtgtaaagaagcatttccttcgcaagtggttaaagatgccgagcctgcacgac
ctggacatccgctctattcttgattggagctattacatagagaggttgggtagtgcaatc
cagaagatcatcaccatccctgcagctctgcaacaggtgaagaatccagttccaagagtg
aggcatcctgactggctacacaagaaactcttggagaaaaatgacatctacaaacaaaag
aaaatcagcgaactgtttaccagtgaggggaagagacaggtggcccatcagcctcttcaa
gcaggccaggctgcagacattgaggactttgggatgccacccaggcccctgcagccagcc
attctcatcagcaccaagcgaaagcgggactcacaggggggcgacagccagacggcatct
caggacgttgagcttacgcagtcctggagagaaatcctgggacctcccccaaccagggga
agaacacgggaggagtgtcttgtgtggctgcgttaccataagaaaaagtgggagctgcag
ctgagacaaaggaaagagagaaagaagagaaggaagctgatggacggtgaagcacaaccc
gtcggcggaggtgtgatcagagacggtcccaccactggcctgggaagctttctccgcaga
acagcgcgcagcatcctggacatgccatggcagattgtgcaaattgcagagacggcccac
cctggtctctacaagctgtgggctgtgattggaagcgacctccactgcatgaaactcaat
atcccgcgcgtcttctacgtcaaccagaaagtcccaaaacaggaggagggggccacgtac
aaaaaggtgaaccgcatgctgcctcgctccaatgtggtgtactacctgtacgagtacacc
gtgctagaggacatgtaccaggagcacatcaatgagatcaacgctgacctctccgcacca
gacatcgaaggggtctatgaaacacaggtccccctgcttttccgtgcactggtgcagctc
ggctgtgtatgcatggtcaacaaaaatggcgtgagggacctggcgggcagggaggccgac
acctttgatctggagcacctagagatgaggtctctggcccagttcagctacctggaacct
ggaagcgttcgtcacatgtacttgtatcatcacagccagggccacaaagctctgtttggc
ctgttcatcccctctcagagaaaagctagcatctttgtcctggacacggtccgaagcaac
cagatgcctaacctgggtaacctctacacggccgagcgcaccgcccttctggagaagacg
acagatgaacttctgcctcctgagaaacacacctttgaggtccgggctgaaaacgacatg
aaggccatctcccgtgctctgcagcgcatactgctcaactacaaggaggaacgacgtggg
cccacccttattgctgtgcagtcaaactgggagttgcgacgactggccgcagggatgcca
gtgctggaggagttcccggtggttccagtgcacgtggtggatgagattagctacaatgtg
ctggactggcaacgtctcggtgctcgccgcatgatccgccattacctcaacctggacagc
tgcctgtcgcaggcttttgacatggccaggtattaccacttaccggtggggaacttgccc
caggatgtgtccatcttcggctcagacttgttcctggcgagacatctgcggaaacacaac
cacctcctgtggctttcgcccactgccaggcccgacctcggaggaaaagaggctgatgac
agtcggctggtcatggaaagcgatgacagaggctcagtggaaatcaatgctcaaggatgt
tactctacagtgtgtgtggagttagacctgcagagcctggcagtgaacaccatcctccag
tcgcagcatgtcaacgacatggaggggggagccagtttgggcgtcagtttcgatgtgatc
cagcaggcctcgttggaggagatgatgtcaggaaatcagggtgcgagcgctcttgctagc
tacgatgagactgctctctgctccaacactttcaggatattaaagagtatggtggttgga
tgggtccgtgagatcacacagttccacaacgtgtatgcagacaaccaggtgatgcacttc
taccgctggctgcgctcgccgagctctttgctctacgacccggcgctgcaccgcaccctg
cacaacatgatgaagaaagtgtttctgcagttggtagcagaattcaaacgtctaggctcg
actgtggtgtatggaaactttaacaggatcatcttgtgcaccaagaagcggaggataaac
gatgccattgcctacatggagtacatcaccaacagcatacactccagagaacttttccat
tctttgtcaatctccttctcccgatgctgggagttcctgttgtggatggatccagcaaac
tctggtggtgtcaaaggaaaactgccttccagcctcttgtctggagaggaaggagccaaa
cagaagaaaggcaggcaaggggagggagatgaggatggcagtgaggatgaagatgaggaa
gaggatgttgaggatgatgatggcgagaccgatgacgtggaggagctgatcgagagcaac
tggaatatcatgcagtacctcccccaaacagcttcctgccaaaaatatttccttatgatc
gtctcagcctacatcgcagctgtttaccacagcatgaaggaggagctgagacgcaacgct
cccggagcaacgccagtcaagagacgtgcagggagccaggcctcccagcagccactcgga
gacttgaacgcacttcctggaatgatttccttctcccaagaatacgtggccagtgagctg
acacagaactttttcacaatcactcagaaaattcagaaaaaggtgactgggtccaggaac
gtaacccagacctcagagatgttccccgtgctgcctggttcacacctgccgctcaacaac
ccagcactggagtttattaaatatgtctgccaggttctttcacttgatgctaacattgtg
aatcaggtgaacaagctgaaaagggacctcctgcgtctcgtggatgtcggtgagttttca
gaggaatcccagttctgtgacccgtgtaactcctacgtcctgccagaagtcatctgccac
cactgtaacttctgccgggacctggacctctgcaaggacccgtctgtggcacaggatggg
tctgtcttgcctcagtggttctgctcaaactgccaggcgcagtttgagacggagtctatt
gagatggctctggtcgaagctttgcagaagaaactcatgagttacacactacaggacctg
gtgtgcaccaaatgtaaaggggtcaaagaagccaacatgcccctctactgtaaatgtgct
ggagactttggcctcactttctcaaccaagagcttttctgagcagatcacagtgtttcgg
aatattgcgtcccactacaacatgagattcctggaggaaaacatcgactggctgcttgtg
atgagccctcagattggccagagctctcattga
DBGET
integrated database retrieval system
