Cololabis saira (Pacific saury): 133450477
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Entry
133450477 CDS
T09849
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133450477 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133450477 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133450477 (usp30)
04121 Ubiquitin system [BR:
csai04121
]
133450477 (usp30)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133450477 (usp30)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133450477 (usp30)
Membrane trafficking [BR:
csai04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
133450477 (usp30)
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133450477 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
133450477
NCBI-ProteinID:
XP_061585113
LinkDB
All DBs
Position
9:complement(29446556..29452143)
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AA seq
503 aa
AA seq
DB search
MLWYRAKSSDKLVVEFLGAGSVIRHKMIKNWSVIGGIAAAVAAGVYVLWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSRLPTIQSCKDNQLSTTLLQLLRAL
SSEEPGEEDVLDAGCVLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDCQPKVTHLF
DMQSLETLAHQDEKSMTCISRAPLHPMPGPWKFQHPFHGRLTSNMSCKRCEIRSPVRYDS
FESLSLSIPLPQWGRPISLDQCLQHFISSETIKEVECGNCTKHHQSIAINGQALESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFSEYLSMDRYKHNSTAQRSRRIK
CTPKAITAHNLDDSAEKPTANETDAEHHNNNKPLSNGTCSSLFLHSPGVNSQLGLTYDYS
SAEYLFQLMAVLVHHGDMHSGHFVTYRRCPSSPRSPSALSSQWLWVSDDSVRKASLHEVL
SSNAYMLFYERVRTAGVSPRSEE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgttatggtacagagccaaaagctccgataagctcgttgtggagttccttggcgcagga
tccgtaattaggcacaagatgataaaaaactggagtgttattggagggatcgctgctgcg
gttgccgctggagtgtacgtgttgtggggcccaatcactgaaagaaagaaaaggaagaga
ggtatggttcctggcctgttaaatttgggcaacacctgcttcttgaactctttgcttcag
ggcttggcagcatgtccgtccttcatcaggtggctggaaaagttttcacgtctgcccaca
attcagtcatgcaaagacaaccagctgtccaccacattgctgcagcttcttagagctttg
tccagtgaagagccaggagaggaagatgttcttgatgctggatgcgtcctggatgttctc
agactttatcgttggcacatcagctcatttgaagagcaggatgcacatgaacttttccac
gtcctcacgtcctctctggaggaggagcgagattgtcagcccaaagtcactcatttgttt
gatatgcagtcccttgagactcttgctcatcaagatgaaaaatcaatgacctgcataagt
agagctcctcttcatccaatgccaggcccttggaaatttcagcatccttttcatggtcgt
ttaactagcaacatgtcatgcaagcgttgtgaaataagaagtcctgtgcgatacgattca
tttgagagcctatccttgtccatacctctacctcagtggggtcgccctatctctctagat
cagtgtctgcagcattttatttcctcagaaaccatcaaagaagtggagtgtggaaactgc
accaagcatcatcaaagcatagcaataaacggtcaagctctagaaagccagaggacgaca
tttgttaaacagttaaaacttggaaagctcccccagtgcctttgtatccatttacaaaga
ctgacatggtccagtgaaggaacccccatcaaacgacaggaacatgttcagttctcagag
tatctatcgatggaccggtataaacacaacagcactgcacagaggagtcggaggatcaaa
tgtactcccaaagccataacggcacacaatttagatgattctgcagagaagcccacagct
aatgagacagatgcggaacatcataacaacaacaaacctctttctaatggaacatgctct
tctttatttcttcactctcctggtgtgaactcacagctcggcctcacttatgactacagt
tctgcagagtaccttttccagctcatggctgtgctggttcatcatggcgacatgcactca
ggacatttcgtcacataccgtcgctgtccttcatcgcctcgcagcccgtcagccctcagt
tcacagtggctttgggtgtctgatgactcggtgcggaaagccagtctgcacgaggtgcta
tcatctaatgcctacatgcttttctacgagagagtgcgaacggctggcgtcagtccacgg
tcagaggagtga
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