Cololabis saira (Pacific saury): 133450554
Help
Entry
133450554 CDS
T09849
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133450554 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133450554 (nipbla)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
133450554 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
HEAT
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
133450554
NCBI-ProteinID:
XP_061585246
LinkDB
All DBs
Position
9:complement(31877406..31921130)
Genome browser
AA seq
2556 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKSMNTDVMQQP
MVPPFKITQNSMHSPAQSANFQPAAISQPAAISPNPSSRFVTPQTGSISCYMGQQNSPVP
SPYTPQSPAPGYIQQYPHQQPPSYNQHQQIQQVSVASPLVPGGIRNIHEGKVSGQMANAP
NHHSDRHGTEDYLNIVQRLGNEEGDSTMRNTSFPLRSPQSGCSPASSDGTPKPGSRPPLI
LQSPPPYTPSPRDGGPDQKQQFQQRKKTPTVKEEKDSYDIVTSPNKDSTKLTLKLSRVKS
NESDPSGDVVPGMDQSSDNIEADLGFQHVPVLQPTRLQQQQVSQLASGASGLQHPSPPND
DVDLDALAEIERIESASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGST
GGGNAGKLTPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPVPALEAQRWPEE
PAGGPAAVEGSDTALRLKPDGRPEVIKNRVDKHDNRREGRESSKHRHDEKSSDRRGEMAK
SSNRGEHGRDRDRESDRDRRHRNETSSRDRPDSRSRSDRDRSGFQASSAGEPGRSGSRQD
GSKPASSAAGPKIPDSFPAQLLGGHSGALKNFQIPKINRDKDGSGSVEGQLWGQPKVKLE
RLGLVKDFEKRPKPVVVLKKLSVDQIQRIIRHSKSGKNRFSSGRSGKSGMDPAVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEVSSDDDFDANGESARKRHRRDKDRSW
EFDERERRGSGDHRKSGNRDSRRGSGSRYRDSSEEDSPPPSMSEIARKLKMKEKQKKRKA
YEPKLTQEELMDSSTFKRFLNSIDNILENLEDVDFTTMADDDEMPQELLLGKHQLNELGS
ESAKIKAMGISSRIPSDKLVKLLNILEKNIQDGSKLTTMMNHDHDAEDEERLWRDLIMER
VTKSADACLTALNIMTSSHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGG
GMLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFF
VENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGE
PMYIQMVTALVLQLIQCVVHLPSDKDFFDEYESKVDQDVLITNSYETAMRTAQNFLSVFL
KKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALR
VASLDYLGTVAARLRKDSVTSKMDQRSIDRILQQSTGNDDTQQLQKALLDYLEENAETDA
SLVFARKFYVAQWFRDATTEAEKSMRSQNQKDEDSSDGPQHAKEMETTGEIMQRAEKRKK
FLRNIIKTTPSHFTTLKMNSDTVDYDDSCLIVRYLASMRPFSQSFDIYLTQILRVLGESA
IAVRTKAMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQL
TEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVKMIRRVNDEEGIKKL
VNETFQKLWFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYK
PAKKACVQLVDNLVEHILKYEESLSENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTM
QPYLTTKCNTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQH
CVSCLGAVVNKVTHNYKFVWACFNKFYGALNKLKIQHQEDPNSTTLVANKPFLLRSLFTV
GALARHFDFDLEEFKGTNKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQM
FVPDVKNLYNGILADRSSSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEM
GDISSGMSSSIMQLYLKQVLEAFFHSQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMG
TDPEPSMRNKADTQLVEIDKKYTGFIHMKAVAGMKMSYSLQQAIHSSRKTIIRGFRHDET
HSALCAHLYSMIRSNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADDLACFPYQSQEEPL
FIMHHIDITLSVSGSNLLQTFKELLLKEPKRKEKKSKKDWGHASDGEDKVEKMNCDFPRS
DEGENGSSEDEQNDDGGVVRRPKKTRRRAANSESSESESDFEDLDVEDVDKVMSLLPDNP
TGLMDFANAVQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKNNVHFNP
RQTMDFISNNIARATLTEDVKRRIVKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAI
NALLGSSGTISGPSPRNQAGPETDDDDSETDDRTPGSSRRSRRVGDPSDPGRMSETVDAM
DVIALWCPKYKDRPQIARVTQKTSSGFSIHWMAGSYSGPWAEAKKRDGRKTVPWVDTIKE
SDIICKKIALTSNHKLSNKVVQTLRSLYAAREGGAS
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctgcccctcccttcccctctacctgctaccaccactaagagcctc
ttatttaatgggaggattgcagaggaagtcacctgcttactgggctgtcgagatgagaat
ctggcctcccagctagctcatggcctcaaccaggtgtccacagagcacatagagctgaag
gacaacctgggtagcgatgagccagagggagatgcaccactgttgctgcagacaatgctg
gccaggaaccctggcatcttcagggagaaaagtatgaatacagatgttatgcagcagcca
atggtaccaccattcaagattacccaaaactccatgcatagccctgcccagtctgcaaac
ttccagccagctgcaatttcccagccagctgcaatttcccccaatccatcaagcaggttt
gtcaccccgcaaaccggttctattagttgttatatgggccaacagaacagtccagtaccc
agcccctacactcctcagagccctgcgccaggttacatacagcagtatccccaccaacaa
cctcccagctacaaccaacaccaacagattcaacaagtgtctgtggcaagcccattggtg
cctggtgggataagaaatatccatgagggcaaagtctcggggcagatggctaacgctccc
aaccaccactcagacagacatggtactgaagactacctgaatattgtgcaacgactgggt
aatgaggagggtgactccaccatgaggaatacttcttttcctctgaggtctccgcagtca
ggctgctctccagcttcaagtgacggaacacccaaaccgggttctcggccaccactgatt
ctacagtcacctcctccttatacaccttcaccaagggatggaggacctgaccagaagcag
cagttccaacaaaggaagaaaaccccgacagtaaaagaagaaaaagattcgtatgacatt
gttacatctccaaacaaagactctacaaaactcacccttaagctgtccagggtcaagtca
aatgaatctgatccttcaggcgatgttgtgcctggtatggatcagagctcggacaatatt
gaagcagacttgggctttcaacacgttcctgttctccagccaacccggcttcaacagcag
caggtctcccagctggcaagtggtgctagtggtcttcagcatcccagtccccctaatgat
gatgttgaccttgatgcccttgctgaaattgaaaggatagaatctgctagtgagaaatgt
tccaaggaagtgcaagataaagacaagccactgaagaagagaaaacaggactcttttccg
ctggagccaggagcagggggacccggtggccctacaggtgctccaggcagtggatcaaca
ggagggggcaatgctggaaaattgactccacaagaggccaccgcagctggaaatggtgcc
agccgccctcccctcatggtgagcatcgacctccagcaagcaggccgagctgatggccag
ctcgacccctgtttggctgcccctgttcctgcacttgaggcccaacgctggcctgaagaa
ccagctggtgggccggctgcagtggagggttctgacacagctttgcggctgaaaccagac
ggacgaccagaagtcatcaagaacagggttgataaacatgacaacagaagagagggtcgg
gagtcatcaaagcaccgtcatgatgagaagtcctcagacagacgaggagagatggccaag
tcatcaaatcgaggggagcatggacgagacagggaccgcgaatctgacagggatagaagg
catcggaatgagactagcagtcgagacagaccagactctcgctcccgaagtgatcgagat
aggtctggcttccaggcctcttccgcaggagagcctggtcggagtggcagtaggcaagat
ggttccaaaccggcgtcatctgctgctggtcctaaaattccagattcttttcccgctcag
ctcctgggagggcatagtggagcactgaagaacttccagatccctaagataaatcgggat
aaggatggcagtggttcagttgaaggtcaactttggggccaacctaaggttaaactagaa
aggctgggtttggttaaggattttgaaaagcgacccaaacctgttgtggttttaaaaaag
ctgtcagttgaccagattcagagaatcattcgacacagcaagtctggaaagaacaggttc
tcatcaggaagatctggaaaaagtggtatggacccagcagttctgaaggagcttccccct
gagttgctggcagagatcgaatctaccatgcccttgtgtgaaagagtaaagatgaacaaa
aggaaacgaagcactgtaaatgagaagccaaaatatgctgaggtcagctcagatgacgac
tttgatgcaaacggagaatctgcaagaaaaaggcatcgcagagacaaagacagaagctgg
gagtttgatgaaagggagagacggggttcaggggatcaccggaaaagtgggaaccgagac
agtcgacgaggttcaggaagccgctaccgtgactcttccgaagaagattcaccaccacct
agcatgagtgaaattgcaagaaaactgaagatgaaggagaagcagaagaaacggaaagct
tatgaacccaaactgacgcaagaagagcttatggactcatctacattcaagaggttcttg
aacagcattgacaacatactagaaaatcttgaggatgtggatttcactaccatggcagat
gatgatgaaatgcctcaggaactattgcttggcaaacaccagttgaatgagctgggtagt
gaatctgccaaaattaaggccatgggcatctccagcaggatcccatcagacaagttggta
aagctcctgaacatattggaaaagaatatccaggatggttccaagctcaccaccatgatg
aaccatgaccatgatgctgaagatgaggaacgactttggagagacttgataatggagcga
gtcacaaagtctgcagacgcctgtctgacagctcttaacataatgacctcatcgcatatg
ccaaaggctgtctacatagaagatgtcatcgagcgagttctacaatacaccaagttccat
cttcagaacacactgtatccacagtatgatccagtctacagggtggacccacatggaggt
ggcatgttgagctccaaggcaaagcgtgcaaaatgctcaacacacaagcaacgtgtcatt
gtgatgttgtacaacaaagtttgtgacattgtcagcaacatttctgagctcctagagatc
caattacttacagacaccaccattctccaggtttcttccatgggaatcactccatttttt
gtggagaatgtcagtgagcttcagttgtgtgccattaaacttgtcacagcggtattctcc
cgatatgagaagcaccggcagctgatcttggaggagatctttacctctttggccagactg
cccaccagcaaacgctcactcaggaatttcaggctgaacagctcggaccaggatggagag
ccgatgtacattcaaatggtaactgctctggtgcttcagctgatccagtgtgtcgtccat
ctccccagtgataaagatttctttgacgagtatgaatccaaggtggatcaagatgtgttg
ataaccaactcttatgagacagcaatgagaacagctcaaaacttcctttcagtcttcctc
aaaaagtgtggcagcaaacagggagaagaagattatcggccattgttcgagaactttgtg
caggacttgctctcaacagtaaacaaaccagaatggcctgctgcagagctgttgctcagt
ctacttggtagactgctggtacatcagttcagtaataaacagacagagatggctctgaga
gtggcatctctagactacctggggacagtggctgcccgtttaaggaaggattcagtcaca
agtaaaatggaccagagatcaattgatcgtatccttcaacagtctacaggcaatgatgac
acccagcagctgcaaaaagctttactggactatctggaagaaaatgctgagacggatgct
tctctggtgtttgctagaaagttttacgttgcccagtggttccgtgatgctacgacggag
gctgaaaagtctatgcggagccagaatcagaaagatgaggactcatcagatggaccacaa
catgcaaaggagatggaaacaactggtgaaatcatgcagcgtgcagagaagcgcaagaag
ttcttgcgcaacatcattaagacaacaccgtctcatttcaccacactgaaaatgaactct
gacactgtggactatgatgactcctgtctcatcgtgcgttatttggcctccatgaggccg
ttttcccagagctttgatatttatttaacacagatattacgagttcttggggaaagtgcc
atcgctgtgaggacaaaagccatgaaatgtctgtcagaggttgtggctgtggatcccagc
attctggcaaggtcggacatgcagcgtggtgtccatggtcggttaatggacaactccacc
agtgtgagagaggcagctgtagaactattgggcaaatttgtgctcagcagaccacaactc
actgagcagtactatgacatgctcatagaaaggatactggacactgggatcagtgtcaga
aagcgcgtcattaagatcctcagagacatctgtctggagcaaccaaccttcagtaagatc
actgagatgtgtgtgaagatgattcggagggttaatgacgaagaaggtatcaagaaactg
gtgaatgagacattccagaagttgtggttcactccaactccagcgcatgacaaagagacc
atgaccagaaagattctcaacatcacagatgtggttgcagcatgtcgagacactggctat
gactggtttgaacaacttcttcaaaatcttctcaaatctgaagaggatgcatcgtataag
ccagccaaaaaggcctgtgttcagctagtggacaatctggttgagcacatcctcaaatac
gaagagtccctttcagaaaacaaaggggtcaactcaacacggctagtggcgtgtatcacc
accttgtacttgttcagcaagatcagagcccagctgatggtcaaacatgccatgactatg
caaccctacctaactacaaagtgtaacactgccaatgacttcatggttatctgtaatgtg
gcaaagatcttggagcttgtggtgccgctaatggagcaccccagtgaaaccttcctcgcc
acaatagaggaagacctcatgaagctcatcatcaaatacggcatgacggttgtccagcac
tgtgtgagctgtcttggagctgttgtaaacaaagtcacacacaattacaagtttgtgtgg
gcttgtttcaacaaattctatggtgcacttaacaagctcaagattcagcatcaggaggat
cctaacagcacaacgttggtagcaaacaaaccctttctgctgcgttcactcttcaccgtg
ggtgccctagcccgccactttgattttgatctggaagagtttaagggcaccaacaaggtt
gttatcaaggagaaagttcttgaactgctgctatactttactaaacatgaggatgaggag
gtcaaaaccaaagcaatcattggcttaggtttccttgtgatcatgcatcccagccagatg
tttgtacctgatgtgaagaacttgtacaatggcattctggctgacaggtcctcctcaatc
aacctcaaaatccagatcctcaaaaacctgcagacataccttcaagaagaagacacacga
atgcaggaagcagaccgagaatggaagaaactgtccaagcaggaggatctgaaggagatg
ggagacatttcttcagggatgagcagctccattatgcagctttatctaaaacaggtgttg
gaggcgttcttccactcccagtccagcgtacggcacttcgctctcaacgttatcgctctc
acacttaaccagggtctcatccatcctgtacagtgtgtaccctacctcattgccatggga
acagacccagagcccagcatgaggaacaaagctgacacgcagctggtggagattgacaaa
aagtacaccggattcattcatatgaaggcagttgctgggatgaagatgtcatacagtttg
cagcaggccatccattcatctcgcaaaaccataataagaggcttcagacatgacgagacg
cactcagctctctgtgcccatctatactctatgatccggtcaaacaggcagcaccggagg
gcgtttctcatctctctgctgaacctctttgatgacagtgctaaaaccgaagtaaacatg
ctgctatttatcgcagacgacttggcttgctttccataccagagccaagaagagcctctg
ttcatcatgcaccacatagacatcacgctgtctgtttcaggcagcaaccttttgcaaacc
tttaaagagcttcttctgaaggagccaaagcgtaaggagaagaagtcaaaaaaggactgg
ggacatgcatctgatggggaggacaaagtggaaaaaatgaactgcgattttcccagaagt
gatgagggagaaaacggcagcagcgaagacgaacaaaacgatgacggcggtgtggtgagg
cggccaaagaagaccagaagacgtgctgcaaactctgaaagctcagaatctgaatctgat
tttgaagatttggatgtggaggacgtggacaaagtcatgtcgctcctccctgataatccc
actggtctcatggacttcgccaatgctgttcagggcatcctgctcttgctggtgctgaaa
cagcacctgaagaatctatatggattctctgacagtaaaattcagaagtattcaccaacc
gagtcagccaaggtgtacgataaggcagtgaacagaaaaaacaatgttcacttcaaccct
cgacaaactatggatttcatctccaacaacattgctcgtgccacactgacagaggatgta
aaaagacggatagttaaacagtacctcgatttcaaggttctgatggaacatctggatcca
gatgaggaggatgaggaaggagaagcatctgccagtgcaaacatcagaaacaaagccata
aacgctctactgggaagctctggcaccatttcaggacccagtccacgcaaccaggcgggg
ccagagacagatgatgacgatagtgagactgacgataggaccccagggtcttcacgaagg
tcaaggcgagtgggtgacccatcggatcccggccgtatgagtgagacagtggacgcaatg
gatgtgatcgccctctggtgccccaaatacaaagaccgaccgcaaatagctcgagtcacc
cagaagacgtcaagtggattcagcatccactggatggcaggttcttactctggaccctgg
gcagaggccaagaaacgtgatggccgcaaaacggtgccttgggtggacactattaaagag
tcggacatcatttgtaagaagattgccttgaccagcaaccacaaactgagcaacaaagta
gtacagactttacgctcgctatatgcagcacgggaaggaggggccagctaa
DBGET
integrated database retrieval system
