Cololabis saira (Pacific saury): 133450575
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Entry
133450575 CDS
T09849
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133450575 (smarcad1a)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133450575 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
133450575
NCBI-ProteinID:
XP_061585292
LinkDB
All DBs
Position
9:33567457..33582216
Genome browser
AA seq
1110 aa
AA seq
DB search
MSLFNLDRFRFEKKATNKEELCGSTSPESEKENQPAHMKPLKAQPKSHPRGVVFEEVLTT
DLEDEEVLSEPNTKISVTKKSKSSSRKASKEVSDHTDDEDELNDKTGKLLELFPQLRRAE
VLQIIESTSTLDGAIAVCLLKFGDREAPAERRKRKQDGSSSSQDSGETQPSKKRRPSLGS
EDEEKEPSWERQEAMVRRLQRRFPDQDKEELRMVLQEHDWNVKDALQVLEMFSDADTSFS
SAGSGEKQSKSKDESTRDDTGLKNHKYEDGKKRKDHKDPKYSRNSRKVEKFTYSTEDSDD
ISDSEAIECTKSRGLSTRDDTGLKNHKYEDGEKRKDHKDPKDHRNSRKVEKVAYGTEDSD
DISDSEAIECSKMSTLSSWITKKSDSVSSAPAVKQTASSSAKPSSSSSASHNLSRFASET
SIAKKQAAERKMKARVSNVDVSSEGEYDDDEEAVSSEFDDSDDDLDTGSVMTDAKTEILT
FFQEASIDELSLITGCSIKKAQKIVELRPFESWSSLYDVFHKGNGLSEDLLVGCKVVLKE
RKVVLGLMSKCQIISTKMVKQVTAVMERGTGSMNQPAVLNSQFHLKPYQLIGLKWLLLLH
EHKLSGILADEMGLGKTIQAIAFLAQLYEHGLEGPNLIIVPASTLDNWVRELKLWCPSLK
VLIYYGSVEERRYLKHDILNEDIEFNVIVTTYNLAIGNDSDRGLFRKLRLNYAIFDEGHM
LKNMNTLRYRHLMAINAEHRVLLTGTPVQNNLLELMSLLNFIMPSMFSNSTSQLSKMFSM
KSHEEQSRFERDRISQAKLIMKPFILRRVKSEVLKQLPAKEEKIEFCSMSEKQQALYESL
LKKLKKSTTGEKRELCNVMMQLRKMANHPLLHRQYYTPDRLKAMSKLMLKEPTHFDADPV
LIQEDMEVMSDFELHRLCQQYSSISSYQLDNSTLLDSGKFHHLVELLASIKNKGDRVVLF
SQFTMMLDIVEVLLKNLKHRYVRLDGSTPIADRIGLIDEYNTDPDIFIFLLSTRAGGLGI
NLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVKVIKLISKDSIEDCILQLGHKKLK
LEQDMTAAEQSEMGTIPEDMASLLKASLGL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttcaatctggaccgctttcgttttgagaagaaggcaacgaacaaagaggag
ctctgcgggtccacgagtcccgagtctgaaaaggagaaccagccagctcacatgaaaccc
ctcaaagctcagccaaagtctcatccacgaggagtagtttttgaggaagtacttaccacc
gacttggaagatgaagaggtcctctctgaaccaaacaccaagatatccgtaactaagaaa
tccaagagctcttcacggaaagcatctaaagaagtgtcagatcacacagatgatgaggat
gagctgaatgacaaaacgggcaaactactggagctgtttcctcagttgagaagagcggag
gttctgcagatcattgagagtacaagcacgctggacggcgccatagctgtctgtctttta
aagtttggagaccgagaagctccagctgaaagacggaagagaaagcaggatggatcaagc
agctcccaggacagtggtgaaactcaaccgagcaagaaaaggagaccatcactgggctct
gaagatgaggagaaggaaccgagctgggagagacaggaagccatggtcagaagactgcaa
agaaggttccctgatcaggacaaggaggagctacggatggtcctgcaggaacatgactgg
aatgttaaagatgctctgcaggttctagagatgttttcagatgcagataccagtttcagc
tcagctgggtcaggagaaaagcaatcgaagagtaaagatgagtcaaccagggacgacaca
gggttgaagaaccacaaatatgaagatggtaaaaagaggaaggatcataaggatcctaaa
tacagtagaaatagtagaaaagttgagaaattcacatactctacagaggatagtgatgat
atttcagactcggaggctatcgaatgcacaaagagtagaggtctgtcaaccagggacgac
acagggttaaagaaccacaaatatgaagatggtgaaaagaggaaggatcataaggatcct
aaagaccatagaaatagtagaaaagtggagaaagtcgcatacggtacagaggatagtgat
gatatttcagactcggaggccatcgaatgctccaagatgtccactctttcttcatggatt
accaaaaaatctgactctgtatcttcagcccctgctgttaaacagacagcttcttcctcc
gcgaaaccatcctcttcctcctcagcatcgcacaacttgtccagatttgccagtgaaacc
agcattgctaagaagcaggcagcagagagaaagatgaaggcacgtgtctccaatgtagat
gtcagctcggagggagaatatgatgacgatgaggaggctgtatcaagcgagttcgatgat
tcagatgatgatctagatactggaagtgtgatgacggacgcaaagacggagatactcaca
ttcttccaggaagcatcgatagatgagctgtcgctcatcactgggtgttccattaagaag
gcccagaagattgtggagctgaggccttttgaaagctggtcaagcctgtacgatgtcttc
cataagggaaatggactttcagaagacttgctggtggggtgcaaagttgtcctcaaagag
cggaaggttgtccttggcctcatgtccaaatgtcagatcatctctacaaaaatggtcaaa
caggtcactgcggtgatggagaggggaacgggctccatgaaccagcccgctgtactgaac
agccagttccatctcaaaccctatcagctgattggtctgaagtggttgttgcttctgcat
gaacacaaactgagtgggatccttgctgatgaaatgggtttggggaaaactatccaggct
atagcatttctggcccagctctatgagcatggactagaaggcccaaacctcatcattgtt
cctgcctccacactggataactgggttagagagttgaaactttggtgtccaagcctcaaa
gttttaatctactatggatctgtggaagagcgacgctacctcaaacacgacatcctcaat
gaagatattgagtttaacgtcattgtgaccacgtacaacttggccataggaaacgacagc
gaccgcggtctgtttcgtaagctgcgcctgaactacgccatatttgatgaaggtcacatg
ttgaagaacatgaacactttgcgctatcgccatctcatggctattaatgcagagcaccgc
gtcctgctgacgggaactcctgtacagaacaacctcctggagctcatgtctctcctcaac
ttcattatgccctccatgttctccaattccacatcacagctttctaaaatgttttctatg
aaatcccacgaggagcaaagccgctttgagagggataggatttctcaggccaaactcatc
atgaagccctttatcctgcgaagagtcaagagtgaggttctcaagcagctcccagcgaag
gaagagaagatagaattctgttccatgagtgagaagcagcaggctctctatgagagcctc
ctcaagaagctcaagaaatccaccactggagaaaagcgcgagttgtgtaacgtgatgatg
cagctgaggaagatggccaaccatcctcttcttcacagacagtactacactccagacagg
ctcaaagccatgagcaaactaatgctaaaggagccaacacactttgatgcagatccagtt
ctgattcaggaggacatggaggtgatgtcagactttgagctgcatcgtctgtgtcagcag
tactcctccatcagctcctaccagcttgataacagtactctgcttgactccgggaaattc
caccacctcgtagagctgctggcctcgataaaaaacaagggagacagagtggtgttattc
agccagttcaccatgatgctggacattgtggaagtgctactgaaaaatctaaagcatcgt
tacgtcaggctggacggatccacacccatcgctgacagaattgggttgattgatgagtac
aacacagatcctgacatatttattttcctgctgtcaacacgtgctggtgggctcggcatc
aaccttacgtcagctaatgtggtcatcttgcacgacatcgactgcaatccgtacaacgac
aaacaggcggaggacaggtgtcaccgtgtgggccagaccaggactgtcaaggtgattaag
ctgatcagtaaggacagtatagaggattgtatcctgcagctcggccacaagaagctaaag
ctggagcaggacatgactgctgctgaacaaagtgaaatggggaccatacctgaggatatg
gcgtcgttgctcaaagcctcactgggactgtaa
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