Cololabis saira (Pacific saury): 133450680
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Entry
133450680 CDS
T09849
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133450680
Membrane trafficking [BR:
csai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133450680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
Ank_2
Ank
Ank_5
SOS1_NGEF_PH
PHD_2
PHD
PHDvar_NSD
Zn_ribbon_NOB1
PH_13
C1_2
Motif
Other DBs
NCBI-GeneID:
133450680
NCBI-ProteinID:
XP_061585472
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All DBs
Position
9:complement(37616804..37675088)
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AA seq
1842 aa
AA seq
DB search
MKLSRRKVPLYGEAKVFALLEGLDPVPEDTEVYVVLEGSTLAHVTRAQSDVMLCFIVPGH
NLAEVVCVQAYLCSETTPLTFVGRASLEYVQDDAQDLAEHLVIHGHCLSAADHRELSSVF
GLGQDSSRWAMDRRVALAMANLDFPPNWNVLGCHADEHSPRESPLHLAVRWGLCRLAELL
LCQPGGLMAANLPNEEGVTPLQLAETADNTELLELLSNPPNPLATPPAGLSQVWADRSRL
LRFCHDTGNLTLTVRQNSRWSSEESRYADIFFLRARIRDEDFLKEIKALRRERVETLLGN
EELVEDPAHSAPYSDINGEKAAEENVPGFFTEDHEEPLMFCLNEEDEVDDPSQSDSEKSR
SIRESQASSPTLAAAARLSAMIHGKDQVYANAMLVDQVDEADIRYRSRGEEEVGLPSHVG
VSCWDSFSATPLDSGTFSQNHYPPSLHHGPGESQGPGLDNHRELSSRITTPSPFASSPSF
PSSPVASALRLFEGAQRRQTQTCPHVSPALNHRECRVADVSRGLSPSLECDSGEEDILGH
SYPCSSIKQRSILRSSSREERDSFDASPDFNRSHSDITQKTSKNSEGTEVRLRSYSYSSP
KAKPSRPLLNRDAAITDLDEDGAFSSSGRSLLQALSLSKSLSRLNHVKQRAFNLTETPKE
KRVLGFRKRAQSAEEESSASPQHLTLTEFLKEIEDEEWDKYIIPSKVESEKYKVSRTFSF
LKNRMSSTRNKTKVKGKELKEGKEKSGSANGHQFVPVSPSGPALCVACDKSVSGKELLQC
SSCFLNVHKTCRESVAACGKKQLERSSALQKSKTMSLPHNSVKENAPATSFSSSSSSPSS
ALAMNKDKREAVTPFTKSLSISVDSRGASDSAAADAEAAVAACTSSSVCEEGTPVTLPST
DLPISTQDTVDAPLLSELSADRLGLDAESWSVAVSPEFCRQHDRRTIKRQDVIYELMQTE
LHHIQTLTVMSEVFRRGMLEELQLDWNCVARIFPCLDPLLLFHRNLFRALQERRQAATQT
EHSHDYVMHQIGDILLQQFSDVNAEKMKQVYGEFCSHHMEAVNVFKELQQQNKKLQNFVR
QQSHKSLVRRRGVPEFILLVTQRITKYPVLLERILLYTQERSQEHLDLSSALAQIRDVIT
TVDLTVSKYERLQELQEVLARLETKSFAKLKNGKVFRKQDVHGKHRDLQYKGLVYWKTAT
GRLKDILALLLTDVLVFLQEKDQRFVFASVDQKPPVIPLQKLIVREVANEERGMFLISAS
SVGPEMYEVHTTTREERNAWMRHIREAVESCPEEEEEEERSVETEEARQAAEVRVQKINK
FQDTLFGQDQQICHNLEEKLQLYAELTELTLHSPEPVPHRHLLVQPAPYTDGELPRQASS
LLTAALREAENLITILQTRNGFSVQSASSPVRGPECCSYNSHGSSVHESPSEPDYLSTLS
MSSTSLGSDSELAGVENVSWSSAVELRKEDSQGTLLKVAESVQSLTQLLYSLQAAVTLQD
SCYEVHKLLLQERERPQPRSLTALQSSPEQEKQRSIDKMKEEKKGLERKREEVDEVQKLH
AKLKQEQQRWDKECVSRERQQSEQETVLEQREQQCLLEAERLRCEREELEAQLLEYQQSL
DRLRKGQRTVEREREKIEAQQRLLQSWRHSRQSSLPVTIPLDGYKGPSHSRSGSLDGSCS
VYKNEVAFLASLQQNHLHQPAKNHNNNQHQHVLSMQTKNHDGSQHSSGYPGNASLSASLY
NSLNALLSQAHSKKPLDGLTHPGYSNNLPDPAQPHRPNNTDLSLLQDTQAPGPWRSEVTG
HGLYKEDFFSSPSLTPLLPPQAYLSLERQNGEEGDEENIVYL
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgagcaggaggaaagtgcctttatatggcgaggcgaaggtatttgcgttgctg
gagggtttagacccggttccagaggacacagaggtctatgttgtcctggaaggatccacg
ctggcccatgtaaccagggctcagagtgatgtcatgctctgcttcatcgtccctggacat
aatcttgccgaggtggtgtgtgtccaggcctacctgtgctctgaaaccacgccgctcaca
tttgtgggcagggcttcgttggagtatgtgcaggacgatgctcaggatctagcagagcac
cttgtaatccacggacattgtctgagcgccgcagatcacagggagctgagcagcgtgttc
ggcctgggccaggacagctctcgctgggctatggatcgcagggtggctttggccatggcc
aacctagatttccccccaaactggaatgtcctggggtgtcacgctgatgaacacagtccc
agagaatctcccctccacctggccgtgcgctggggactgtgtcggcttgcggagctgttg
ctttgtcagccagggggcttgatggctgctaatctgcccaacgaagaaggagtcacacca
ctgcagctggcagagaccgcagacaacaccgagctcctggagctgctctcaaaccctccc
aaccccctcgccacccccccggcaggtctgtcccaggtgtgggcagaccggtcccgcctg
ctgaggttctgtcacgacacggggaacctgactctgaccgtccgacagaactccaggtgg
agctcggaggagagccggtatgctgacatcttttttctcagagcgagaatccgagatgag
gacttccttaaagagatcaaagcactcagaagagaacgggtggagactctcttagggaat
gaagagctggtggaggatcctgcacacagcgcgccgtactctgacataaacggagaaaag
gctgcagaagaaaatgttccaggtttcttcactgaggaccatgaggagccgctgatgttt
tgcctgaatgaagaggatgaagtggacgacccatcgcagtctgactctgagaaaagccga
tccataagggagagccaagcctcgtccccaactctggcggcagctgccagactgtcagcg
atgatacacggcaaagaccaagtgtacgcgaatgccatgctggtggaccaggtggacgaa
gctgacattaggtatcggtctcgaggggaggaagaggtcggccttccgtcccatgtcggt
gtctcctgctgggattccttctcggccactccactcgattcagggactttttcccagaac
cattacccaccgtcactccaccatgggcccggagaaagccaaggccccggcctggacaat
catagggagctatcctctcgcatcaccaccccctctcccttcgcttcctccccctctttt
ccttcctctcccgtggcttccgccctccgtttgtttgagggagcacagaggcgtcagacg
cagacatgccctcacgtttcccctgccctgaatcacagggaatgtcgtgtagctgatgtc
agccggggcctgagtcccagtctagagtgcgacagtggagaggaggacatactgggacac
tcctacccgtgctcgtccataaagcagcgctccattctgcggtccagctcaagagaagag
agggactcgttcgatgcgtcgcctgattttaatcgctcgcattctgacatcacgcaaaaa
accagcaagaattcagagggcacagaggtgcgtctgcggtcctactcgtattcctccccc
aaagcaaagccatcgcggccgctgctaaacagagacgcagctatcaccgacctggacgaa
gatggagcgttcagcagcagcggtcgctccctccttcaggctttatctctttctaaatcc
ctttctcgtctcaaccacgttaagcagagggcattcaacctgactgagacacccaaagaa
aagagggttttgggtttccgtaagcgggcccagtcagcagaggaggagagcagcgcatca
ccccaacatctcaccctcacagagttcctcaaagagatcgaggatgaggagtgggataaa
tacataatcccatccaaagttgagtcagagaagtataaagtgagccggaccttcagcttc
ctcaagaataggatgtccagcacccgcaacaaaacgaaggtgaaggggaaagagttgaag
gaaggaaaggagaagtcgggatctgctaatggacaccaatttgttcctgtgtctccatct
ggcccagctctctgtgtggcctgtgataagtctgtttctgggaaagagctgctgcagtgc
tccagctgcttcctgaatgtccataaaacctgtcgagagtctgttgcagcctgtggaaag
aagcagctggagcggagctcagcgctgcagaaaagcaagaccatgtctctgccacataac
tcggtgaaggagaacgccccggcaaccagtttctcctcgtcttcctcctccccctcttca
gccctagcgatgaacaaagacaaaagagaagcagtcactccttttaccaaaagcctttcc
atctccgtagacagcagaggagcgagtgactcagcggcagcagacgctgaggccgctgtg
gcagcttgcacgagcagctcggtgtgtgaggagggaacacctgtcactcttccatccacc
gacctgcccatcagcacgcaggatactgttgacgctcctttgctgagcgaactgtcagct
gaccggctgggacttgacgcggagtcatggagtgttgcggtcagtccggagttctgcagg
caacacgacaggcgcaccatcaaacggcaggacgttatttatgagctcatgcagacggag
ctgcaccacatccagacgttgacggtcatgtcagaggtgttcaggagaggcatgctggag
gaactgcagctagattggaactgcgtggcgcggatcttcccgtgcttggatcccctgctg
cttttccacaggaacctgttcagagcgctgcaggagcgccggcaggctgcgacccagact
gaacactcacacgattacgtcatgcaccagataggagatatactacttcagcagttctca
gatgtgaatgctgagaagatgaagcaggtgtatggagagttctgcagtcaccacatggag
gctgttaacgtcttcaaagagctgcagcagcagaacaagaaactgcagaactttgtcaga
caacagagccataagtctctcgtcagacggagaggcgtgccagagttcatcctgctggtc
actcagcgaatcaccaagtacccagtgctgctggagaggatattactgtacactcaggag
cggagtcaggaacacttggacctgtcgagtgctctggcccagatccgggacgtcatcacc
acagtggacctcactgtgagtaagtatgagaggcttcaggagctgcaggaagtgctcgct
cggctcgagaccaagagtttcgccaagctgaagaatggcaaggtgtttcgcaagcaggat
gtgcacggcaagcacagggatctgcagtacaaaggcctggtctactggaagacggccacc
ggacgtctcaaagacattctagcccttttgctcacggatgttctggttttcctccaagag
aaagaccagcgctttgtttttgcgtctgtggaccagaagcccccggtcatccctttgcag
aaactgatcgttagagaagtcgccaatgaggagagaggaatgttccttatctcggcctcc
tcggtggggccagagatgtacgaagttcacaccaccaccagagaggagaggaatgcatgg
atgagacacatccgagaggctgtggagagttgtcctgaggaagaagaggaggaggagcga
agcgttgagacagaggaagccaggcaagccgcagaagtgagagttcagaagattaacaag
ttccaggatacactgtttggacaggaccagcaaatctgccacaacttggaggagaagttg
cagctttatgctgaacttacagaattaaccctccactcgccagagccggtgccacatcgc
catctgctggtgcagccagcgccgtacaccgacggcgagctgccacgtcaggcgtcgtca
ctgctcacagctgctctcagagaagcggagaacctaatcactatccttcagacccgcaat
ggtttctctgtccaaagtgcgagctctccggtccgagggcctgagtgctgcagctacaac
agccacggcagcagcgtccacgagtctccctctgaaccagactatctgagcacgctcagt
atgagctctacgtcgctcggatcggacagcgagttggcaggagtggagaatgtgtcgtgg
agctcggctgtcgagctcaggaaagaagacagtcaagggacgctgttaaaggtggcagag
agcgtccagagcctgactcagcttctctacagtctgcaggcagctgtgacccttcaggac
agctgctacgaagttcacaaacttcttctccaggagagggaacgacctcagcctcgaagc
ctgaccgccctccaaagcagcccggaacaagagaagcagagaagtattgataagatgaag
gaggaaaagaaaggtttggagaggaagagagaggaggtggatgaggtgcagaaactccat
gcaaagctgaaacaggaacagcagcgttgggacaaggagtgtgtgtcccgagagagacag
cagagcgagcaggagaccgtgctggagcagcgagagcagcagtgcctcctggaggcggag
cggctgcgctgcgagcgcgaggagctggaggctcagctgctggagtatcagcagagtctg
gacaggctgaggaagggccagcggacggtggagagggagcgggagaagatcgaagcccag
cagaggctgctccagagctggagacacagccgccagagcagcttgccagtcaccataccg
ctggatggttacaaggggcccagtcacagccgctcaggcagcctggacggaagctgctcg
gtgtacaaaaacgaggtggctttcctcgcctcgctgcaacagaaccacctccaccagccc
gctaagaaccacaacaacaatcagcaccaacacgtgctgtccatgcagacgaagaaccac
gacggctcacagcacagctccggttaccctggcaacgccagcctcagtgccagcctgtac
aacagcctcaacgccctgctgagccaggcacacagcaagaagcccctggacggtctgaca
caccctggctacagcaacaacctccccgaccccgcacagccacacaggcccaacaacaca
gacctcagcctgctgcaggacacgcaagctcctggtccctggaggtcggaggtcacgggt
cacggactttacaaggaggacttcttttcctctccatctcttacaccgcttcttcctcca
caggcttacctctcgctcgaacgacaaaatggagaagagggagacgaggaaaatattgtt
tacctctga
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integrated database retrieval system
