Cololabis saira (Pacific saury): 133450687
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Entry
133450687 CDS
T09849
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04142
Lysosome
csai04144
Endocytosis
csai05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133450687 (cltcl1)
04142 Lysosome
133450687 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133450687 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133450687 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133450687 (cltcl1)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
133450687 (cltcl1)
Exosome [BR:
csai04147
]
Exosomal proteins
Proteins found in most exosomes
133450687 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
LVIVD
Motif
Other DBs
NCBI-GeneID:
133450687
NCBI-ProteinID:
XP_061585485
LinkDB
All DBs
Position
9:complement(37880608..37921753)
Genome browser
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGDQNQVVIVDLSDPTN
PLRRPISADSAIMNPASKVIALKAAKTLQIFNIEIKSKMKAHTMTEEVMFWKWISVNTVA
LVTDSAVYHWSMEGDSQPAKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNAQSSTLFCFAVRSQAGGKLHIIEVGQPATGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHETTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLAFRMAVRSNLAGA
EELFARKFNTLFAQGSYSESAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTTDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPFY
DSAVVGRYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EEDNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYEAAKLLFNNVSNFARLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAAITMMS
HPTDAWKEGLFKDIVAKVANVELYYKSLSFYLDYKPLLLNDLLTILSPRLDHSRTVNFFS
KMNQLKLVKPYLRSVQSHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLED
DRKECFAACLFASYDLLHPDVVLELAWRHNIIDFAMPYFIQVMREYLTKVDEFAAQVTVD
KLEVSESQRKTEEEVTEPQPIVFGQQLMLTGAGAAAPVTPQPAYPGYSYPANAAGYPTPP
PYGFNM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactacccatacgatttcaggagcatctgcagctgcagaacctgggcgtg
aacccggccaacatcggcttcagctacctgaccatggagtcggacaaattcatctgcatc
agagagaaggtgggcgaccagaaccaggtggtgatcgtggacctgtcggaccccaccaac
ccactgaggagacccatctctgctgacagtgccatcatgaaccccgccagcaaggtcatt
gccttaaaagctgccaagacgctgcagatcttcaacattgagatcaagagtaagatgaag
gctcacaccatgacggaggaagtcatgttctggaagtggatatcggtaaacaccgttgcc
ctggtgacggactcagccgtctaccactggagcatggagggggattcccagccggccaaa
gtattcgatcggcatgccagtctggcggggtgtcagatcattaactacagaactgacgag
cagcagaagtggctcctgctgataggaatctctgcgcagcaaaaccgcgtggttggggcg
atgcagctgtattccgtcgacaggaaagtctcccagcccatcgaaggccatgctgccgcc
ttcggggagtttaaagtggagggaaatgcccagtcctccaccctcttttgctttgcagtg
cgctcacaggctggtggaaagttgcacatcattgaagttggtcagccggctacaggaaac
cagccatttgctaaaaaagcagtggatgtgtttttcccaccagaggctcagacagatttt
ccagttgccatgcagattggcaacaagcacggtgtaatatatttaatcaccaagtacggc
tacatccacctctacgacctggagtctggggtctgtatctacatgaaccggatcagcgca
gagaccatttttgtaacggccccccacgagaccacgtcggggatcatcggtgtcaacaag
aagggacaagtcttgtcagtgtgtgttgaagaagaaaacattgtcaattatgccacaaac
gtcctgcagaacccagatctggccttccggatggctgtcaggtccaatctggccggggcc
gaggagctgtttgccaggaagttcaacactctgtttgcccagggaagttattccgagtct
gcgaaggttgctgcatcagcacccaagggtatccttcggacggcagaaacgatccgtaag
ttccagagtgtcccggctcagccgggtcaggcctctccgctcctgcagtactttggcatt
cttttggaccagggccagctcaacaagttcgagtctctggaactgtgcaggcccgtcctg
cagcagggccgcaagcagctcctggagaagtggctgaaggaggacaagctggagtgctca
gaggagctgggagatctggtgaaaacaacggacccaaccctggctcttagtgtgtacctt
agagctaacgttcccaacaaggtcattcagtgctttgctgagactggccagttccagaag
atagtgctgtatgctaaaaaggtgggctacaccccagactgggtttttctgttgaggaat
gtaatgcgcgtcaatcccgaccagggactgcagtttgcccagatgctggttcaggatgag
gagccgctcgccaacatcaaccagattgtagatgttttcatggagggcagcttgatccag
cagtgcacctccttcctgttggatgctttgaagaacaaccggccagctgaaggtcacttg
cagacccgcctgcttgagatgaacttgatacacgcaccccaggtagcagatgccatcctg
gggaaccagatgttcacgcactatgatcgggcccacgtggcccagctgtgtgagaaggcc
gggctgctgcagagagctctggagcactacaccgacctctacgacatcaaacgagccgtg
gtgcacacgcatctgctgaaccccgagtggctggtaaactttttcggctccttgtcagtg
gaagactctttggagtgtttaagggccatgctgtctgctaacatcaggcagaacctgcag
ctgtgtgtccaagtggcatccaagtatcacgagcagctgggaactcaggcactagtggag
ctgtttgagtccttcaagagttatgagggcttgttttacttcctcgggtccatcgtgaac
ttcagtcaggagcccgacgttcacttcaagtacatacaggctgcctgcaagacgggacaa
atcaaagaggtggagagaatctgtagggaaagtaactgctatgacccagagcgggttaaa
aacttcctcaaggaggctaaactaacggaccagctgcctctcatcattgtctgcgaccgc
tttgactttgtccatgatctggttctctacctctaccgcaacagtctgcagaaatacatc
gaaatctacgtacagaaagtgaaccccagtcgactgcctgtggtgatcggcggcttgttg
gacgtggactgttctgaggacgtcatcaaaaacctgatcatggtggtcagggggcagttt
tccaccgacgaactggtggaggaggtggagaaaaggaacaggctgaagctcctgttgcca
tggctggagtcgcgtatccacgaaggctgcgaggagccagctacccacaatgccctggcc
aagatttacatcgacagcaacaacaccccggagcgcttcctgaaggagaacccgttttac
gacagcgctgtagtgggacgctactgtgagaaaagagacccccacctggcgtgcgtggcg
tacgagagaggccagtgtgacctggacctcatcaaggtttgcaatgagaactcgttattc
aagagcgaggctcgatatctggtgcggcgaaaagatcccgagctgtgggcgaacgtgctg
gaggaagacaaccccttcagaagacagctcattgaccaggtggtgcagacggctctgtcg
gagacccaggacccagaggaggtgtcggtcacagtcaaggccttcatgactgcagacctg
cccaacgagctgatcgagctgctggagaagattgttctggataactctgtcttcagtgaa
cacagaaaccttcagaatctgctgattttaaccgccatcaaagccgaccgcactcgcgtg
atggagtacattaacaggctagacaattacgacgctcctgatattgcaaacatcgccatc
agtaacgagctttttgaagaggcgtttgccattttcaagaagtttgatgtcaacacttca
gctatacaggtattgatagagcacataggaaacttggaccgtgcctatgagtttgccgag
cgctgtaatgagcctgcggtgtggagccagttagccagagctcagctgcagagagacttg
gtcaaggaggccatcgactcgtacattaaagccgtggacccgtcagcgtacatggaggtg
gtcaatgcagccagcaaaaacgataactgggaagacttggtcaagttccttcagatggcg
cggaagaaagccagagagtcgtacgtggagacggagctgatctttgctctagcgaagaca
aaccggctggccgagctggaagaatttgtcagcgggcccaacaatgcacacatacagcag
gtgggagatagatgttatgaggaggggatgtacgaagcagccaaactcttgttcaacaac
gtgtccaactttgctcggcttgcgtccacgttagtccatctgggagaataccaggcagcc
gtggacggcgccaggaaagccaacagcacccgcacctggaaggaggtttgctttgcgtgt
gtggacggtgaggagttccggttggcccagatctgcggcctgcacatcgtgatccacgct
gacgagctggaggacctgatcagctactaccaggaccgcggctactttgaggagctcatc
gctctgctggaggccgctctcggtctggagcgggcccacatgggcatgttcacggagctc
gccatcctctactccaagttcaaacctcagaagatgagagagcacctggagctcttctgg
tccagagtcaacatcccaaaggtccttcgtgcagctgaacagtctcatttatgggcagaa
ctggttttcctttatgataaatatgaggagtacgacaacgctgcgatcactatgatgagc
catccgactgatgcgtggaaagaagggctgttcaaagacattgtcgctaaggttgctaat
gtggagttgtactacaagtccctttctttctacctggattacaaacccctcctgctcaat
gacctgctcactattttatctccacggctggaccacagcagaactgttaacttttttagc
aagatgaaccagctgaagttggtcaagccttacctgagatctgtccagagtcacaacaat
aagtctgtcaatgaagctctaaacaacctgctgacggaagaggaagactaccagggtctg
agagcgtccatcgatgcctacgacaactttgacaccatcggcctggctcagaggttagaa
aaacacgaactgatcgagttcagacgtatcgctgcttatctgtacaagggaaacaaccgc
tggagacaaagtgtggagctctgcaagaaagacaaactttataaggatgcaatgctgtac
gctgctgagtccaaagatgctgagctggcagagactctgctgcagtggttcctggaggac
gataggaaggagtgctttgctgcctgcctgttcgcctcctacgacctgctgcaccccgac
gtggtgctggagctggcctggaggcacaacatcatcgactttgcaatgccgtacttcatc
caagtcatgagagaatacctcacaaaggttgatgagtttgcagcgcaggtgacggtggac
aaactggaggtgtcagagagccaaaggaagactgaggaggaggtgacggagcctcagccg
atcgtgtttggccagcagctgatgttgaccggcgcgggggcggcggctccagtgacccct
cagccagcgtacccgggttacagctaccccgccaacgccgccggttaccccaccccgcct
ccgtacggcttcaacatgtag
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integrated database retrieval system
