Cololabis saira (Pacific saury): 133450693
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Entry
133450693 CDS
T09849
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133450693 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133450693 (polb)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133450693 (polb)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
133450693 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
133450693 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
DUF4806
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
133450693
NCBI-ProteinID:
XP_061585500
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All DBs
Position
9:38005259..38011861
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AA seq
342 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKSNAYRKAASTISKYPNKIKNGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEDGVK
TLDDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMAKMEVLIHRELEKIDTEYIGTICGS
YRRGAASSGDIDILLTHPDYTSQTEKQAKLLHDVVDHLVSIGFVTDTLSKGDTKYMGVCQ
LQRNDDDDEEEEEEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTL
NEYTIRPLGVTGMAGEPLFVDSERDIFEYIQYKYREPKDRSQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcgccgcaggaatccttaaatgaaggaataacagactttctagtt
gagctggccaactacgagaaaaatgtcaacagggccatacacaagtccaatgcatacagg
aaagcagcatctaccatttctaaataccctaacaaaatcaagaatggagaagaagccaag
aaactggatggtgtgggagctaaaatagcagaaaagattgatgaattccttcagactgga
aaactaagaaagctggaaaagatccgaaatgatgacaccagctcttccatcaattttctc
accagagttactggcattggccctgctgctgccagaaagttttttgaagatggggtgaag
acattggatgatttgaaaaagattgagcacaagctgaatcatcatcaacagattggtctc
aagtactttgaagaatttgagaaaaggatcccaagagctgaaatggcaaagatggaggtt
cttattcacagggaattggagaaaatcgatacagaatacattggcacaatctgtggaagc
tacaggagaggtgcagcatcaagtggtgatattgatattttactgacccacccagactac
acgtctcaaactgagaagcaggctaagctccttcatgatgtggtggaccatctggtgtcc
attgggtttgtgacagatactctgtccaaaggagacaccaagtacatgggagtctgccag
ctgcagcggaatgatgatgatgatgaggaggaggaggaggaggaagaatacctccacagg
cgtattgatattaggttgattcccaaggatcagtactactgtggagttctttacttcact
ggaagtgacatctttaataaaaacatgaggactcacgctctagaaaagggcttcactctg
aacgagtacaccatccggccactaggtgtcactggtatggcgggagagcctttgtttgtc
gatagtgagcgagacatatttgaatacatccaatacaaatacagagaaccaaaagaccgc
agccagtga
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integrated database retrieval system