KEGG   Cololabis saira (Pacific saury): 133450693
Entry
133450693         CDS       T09849                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133450693 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csai03400]
    133450693 (polb)
Enzymes [BR:csai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     133450693 (polb)
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     133450693 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     133450693 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2 HHH_2 DUF4806 Autophagy_act_C
Other DBs
NCBI-GeneID: 133450693
NCBI-ProteinID: XP_061585500
LinkDB
Position
9:38005259..38011861
AA seq 342 aa
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKSNAYRKAASTISKYPNKIKNGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEDGVK
TLDDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMAKMEVLIHRELEKIDTEYIGTICGS
YRRGAASSGDIDILLTHPDYTSQTEKQAKLLHDVVDHLVSIGFVTDTLSKGDTKYMGVCQ
LQRNDDDDEEEEEEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTL
NEYTIRPLGVTGMAGEPLFVDSERDIFEYIQYKYREPKDRSQ
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgagcaagaggaaagcgccgcaggaatccttaaatgaaggaataacagactttctagtt
gagctggccaactacgagaaaaatgtcaacagggccatacacaagtccaatgcatacagg
aaagcagcatctaccatttctaaataccctaacaaaatcaagaatggagaagaagccaag
aaactggatggtgtgggagctaaaatagcagaaaagattgatgaattccttcagactgga
aaactaagaaagctggaaaagatccgaaatgatgacaccagctcttccatcaattttctc
accagagttactggcattggccctgctgctgccagaaagttttttgaagatggggtgaag
acattggatgatttgaaaaagattgagcacaagctgaatcatcatcaacagattggtctc
aagtactttgaagaatttgagaaaaggatcccaagagctgaaatggcaaagatggaggtt
cttattcacagggaattggagaaaatcgatacagaatacattggcacaatctgtggaagc
tacaggagaggtgcagcatcaagtggtgatattgatattttactgacccacccagactac
acgtctcaaactgagaagcaggctaagctccttcatgatgtggtggaccatctggtgtcc
attgggtttgtgacagatactctgtccaaaggagacaccaagtacatgggagtctgccag
ctgcagcggaatgatgatgatgatgaggaggaggaggaggaggaagaatacctccacagg
cgtattgatattaggttgattcccaaggatcagtactactgtggagttctttacttcact
ggaagtgacatctttaataaaaacatgaggactcacgctctagaaaagggcttcactctg
aacgagtacaccatccggccactaggtgtcactggtatggcgggagagcctttgtttgtc
gatagtgagcgagacatatttgaatacatccaatacaaatacagagaaccaaaagaccgc
agccagtga

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