Cololabis saira (Pacific saury): 133450709
Help
Entry
133450709 CDS
T09849
Symbol
snx18a
Name
(RefSeq) sorting nexin-18a
KO
K17923
sorting nexin-9/18/33
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133450709 (snx18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133450709 (snx18a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133450709 (snx18a)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
133450709 (snx18a)
Macropinocytosis
Sorting nexins
133450709 (snx18a)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
133450709 (snx18a)
BRITE hierarchy
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_1
SH3_2
Vps5
XFP
Motif
Other DBs
NCBI-GeneID:
133450709
NCBI-ProteinID:
XP_061585520
LinkDB
All DBs
Position
9:38403459..38419575
Genome browser
AA seq
586 aa
AA seq
DB search
MALRARALYDFHSENPGEVSVRESEVLTLHSEQDIDGWLEGSNSRGERGLFPASYVEVLR
GDAGDAAASPPSAAGDTFPDSRYANIPPGGFDSSYKPKVENFPKASPPGFSTFTVPLQQH
PQHQHQYQQPSQGSDDDWDDDWDDSSTVADEPGTGGGRYHDFEGNGPSTYRVSTSSMARG
QAQQAKSSATVSRNLNRFSTFVKSGGEAFVLGEAAGFVKDGDKICVVTGQYGPEWQENPY
PFSCAIDDPTKQTKFKGMKSYISYKLTPTHTQNPVNRRYKHFDWLYARLVEKFPVISVPH
IPEKQATGRFEEDFISKRRKGLIWWMNHMTSHPVLARCDVFQHFLSCTDEKAWKQGKRKA
EKDDMVGANFFLTISPPAAPLDFQEVESKVDGFKTFTKRMDDSALQLNATVSEFARKQIT
GFKKEYQKVGISFKVLSQAFEMDQQAYSVGLNQAISFTGDAYEAIGEYFSEQPRQDLDPI
MDLLALYQGHLANYPDIIHVQKGALTKVKESQKHVEEGKMDLAQAEGINDRCNIISFATL
AEIQHFHQIRVRDFRAQMQHYLQQQIAFYQKITGKLEEALHKYDDA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgagcccgggcgctgtacgacttccactccgagaacccgggggaggtgtcg
gtgcgggagagcgaggtgctgaccctgcacagcgagcaggacatcgacggctggctggag
ggcagcaacagccgcggggagcgggggctgttccccgcctcctacgtggaggtcctgcgg
ggcgacgcgggcgacgccgccgcctccccgcccagcgcggccggggacactttccccgac
tcccgctacgccaacatcccccccggggggtttgacagctcctacaagcccaaagtggaa
aactttcccaaggcttctcctccgggcttcagcaccttcacggtccccctgcagcagcat
ccccagcatcagcaccagtaccagcagcccagccagggcagtgatgacgactgggatgat
gactgggatgacagctccaccgtggccgatgagccaggcaccgggggaggaaggtaccat
gactttgaagggaatggaccctccacctacagggtgtcaacgtcctccatggcgagaggt
caagcacagcaggcaaagagctctgccaccgtcagcagaaacctgaaccggttctccacc
tttgtgaagtctggaggagaggcgttcgtgctcggggaggcggccgggttcgtgaaagat
ggggataagatctgtgtggtgacgggccagtacggccccgagtggcaggagaacccgtac
ccgttcagctgtgccatcgatgaccccaccaagcagaccaagttcaagggcatgaagagc
tacatttcctataagttgacgcccacacacacgcagaacccggtgaacaggaggtataag
cactttgactggttgtacgctcgcctggtggagaagtttcctgtcatctcggtgccacac
atcccagagaagcaggccacaggtcgctttgaggaggatttcatctccaagaggagaaag
ggcctcatatggtggatgaatcacatgaccagccaccctgtcctggcccggtgtgatgtc
ttccaacatttcctctcctgcacggacgagaaggcctggaagcaggggaaaaggaaagcg
gagaaggacgacatggtcggggccaacttcttcctcaccatcagccctccggcggctccg
ctcgacttccaggaggtcgagagcaaagtggatggattcaagacttttaccaagaggatg
gatgacagcgccttgcagctcaatgccaccgttagtgagttcgctcgcaagcagatcacc
ggctttaagaaggagtatcaaaaagtgggaatctcatttaaggtcctgagccaggctttt
gagatggatcagcaggcgtactccgtaggactcaaccaggccatctccttcactggagac
gcgtatgaagcaatcggagagtacttttctgagcagcctagacaggatcttgacccaatc
atggatttattagctctttaccaaggacacctggcaaactacccagacatcatccatgtt
cagaaaggagccctgacaaaggtgaaagagagccaaaagcacgtggaggaaggcaagatg
gacctggcccaggcagaaggcatcaacgaccgctgcaacatcatctccttcgccacgctg
gccgagatccagcacttccaccagatccgcgtgcgagacttcagggcacagatgcagcac
tatctccagcagcagattgccttctaccagaagatcacagggaagctagaagaggctctg
cacaagtacgacgacgcgtaa
DBGET
integrated database retrieval system
