Cololabis saira (Pacific saury): 133450780
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Entry
133450780 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133450780
04020 Calcium signaling pathway
133450780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133450780
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133450780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
133450780
NCBI-ProteinID:
XP_061585641
LinkDB
All DBs
Position
9:44836525..45081617
Genome browser
AA seq
2351 aa
AA seq
DB search
MARGFEDEPSSRYGGPAGPGRGPPGAPRVYKQTMAQRARTMALYNPNPVRQSCLSVNRSL
FLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPASDKTPMSERLDDTEP
YFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATAGADFDLRTLRAVR
VLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGKFHYTCFR
SDSGEQVADFPCGQEAPARTCGNGSVCRDYWIGPSYGITNFDNILFAVLTVFQCITMEGW
VDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLR
RQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSLDGAWYKKKHNNSVLKRTKKSKNDL
ISAEEGDDHFTDISSVAPPGSPFARASVKSKNENSSYFRRKAKRIRFTTRRLVKSQSFYW
TVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFLAEMSMKMYGLGPQNYFHSSF
NCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSM
KSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDETPTTNFDTFPAAILTVFQILTGEDWN
AVMYHGIESQGGVHGGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQE
EAINKKLAMQKAKEVKEVSPMSATNISITASYVCTPVHHYLSKEQLRPVKMISVWEQRAN
QMRKQNWASCEALYNELESEERIRLSSALHIRPDMKTHLDRPLVVESSDGALQGGHQHHH
HKTYTPEEGKTTTDPPSSPRHSHHRHHRHPDRGRAKSKEEANDNGGPGKEGRRHVHHIRS
KEHDCSRSKDGKSERSRSREGGGMQHHQSSVEDGGGRGVTGEKHRHHHSHRQSRGGNGTV
NNDGKGERRSRRKDGRSSNREVDRNSRGQSVTNGERRRHRTHGSRGQTTAGGEEPTEKEK
IHSHRFGDSEGDSSAISPQQETSFPADHPEDSDNQKNIRRTSQSSVHIPPVTITSPPGET
TLIQMNSIDCEMMPMNEKALEDLCQTGPKPILPYSSMFMFGQTNPVRRLCHYIVTLRYFE
MSILVVIAMSSIALAAEDPVWTNAPRNQVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGS
YFRDLWNILDFIVVSGALVAFAFSSFMGRSQQGVTRGTKGKDISTIKSLRVLRVLRPLKT
IKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLEKD
CKGQFLDYDKEEVSAMPREWRKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFED
EGPSPGYRIEISIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACID
FAINARPLTRYMPENTQSFQYRMWKFVVSAPFEYSIMIMIALNTVVLMMKFHGAPDFYEA
LLKNLNIVFTTLFSLECILKIIAFGPLNYLKDAWNMFDFVTVLGSITDILVTEINTTNKL
LNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVF
GNIELNDDTAITHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDEQAGSGKTCG
SDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAA
CGRIKYLDMYQMLLHMPPPLGLGKKCPPRIAYKRLVKMNMPIADDTTVHFTSTLMALIRT
ALEIKLASGMVVQRLLDAQLKKELSTVWPNLSQKSMDLLVTPHKPNELTVGKVYAALMIF
DYYKQNRARRLQLQQHSGSNSQCKVGALFKPLLPLTHMQESNMINSEVPPSMPQLQNKPN
SKPHPLTSPSSNSLNNKGTPSSYDHRIRSSSSWGMEKHKEVDRDKMKKTLSGGPSEDTPN
TTVIQESVEMRKMETSISSSITIPDSGLESQSRAASMPRLSAETQSVHHTSPMRHSASAA
GPQRRPPEGTLQEPDPEKPRQERVHHHHHHHRCHHRRDRDRDREKRQRSLDMPLGGQLPG
SAGVPGEPVPDPAAARDPAPDRGRSQDRKHHHSSADRQRYYSCDRYCGREHCSTKSAAAS
CAVSPSEGPEPRNPQGSGWVKDGVVALNSSSSAPSRGRRQLPQTPLTPRPGVAYKTSTSS
PVHSVSSQASWIPSRLSRDLSEHTALRHGGSHHSPCPVTRICSEPFLGRGHGETPGSPHG
SLQDQLDVFQDTPSHSPSSSAGSSSRTTLPRAMGALLPTLGVELDVPNGYHFSLGADTSS
GSGTKVRRYRR
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaggcttcgaggacgagccgtccagccgctacgggggccccgcggggccgggc
cggggccccccgggggccccccgggtctacaagcagacgatggcccagcgggcccggacc
atggccctgtacaaccccaaccccgtccggcagagctgcctctccgtcaaccgctccctg
ttcctcttcagcgaggacaacgtcgtcaggaagtacgccaaaaagatcaccgagtggcct
ccgttcgagtacatgatcctggccaccatcatagccaactgcatcgtcctggccctggag
cagcacctgccggcctccgacaaaacccccatgtcagagcgtctggacgacacagagcct
tattttattggaatattttgtttcgaggctgggatcaagatcatcgccctgggctttgcg
tttcacaaaggctcctacctacgtaatggctggaatgtaatggactttgtggtggtctta
acagggatcctggccacggcgggggccgacttcgatctgaggaccctgagagcagtgagg
gtcctgcggcccctaaaactcgtctccggcattccaagtcttcaggttgtcctaaagtcc
atcatgaaggccatggtacctctgctacagatcggcctactcctcttcttcgccatcctc
atgttcgcaatcatcggccttgacttctacatgggcaagttccactacacctgcttcaga
tcagactcaggtgagcaggtagcagatttcccgtgtggccaggaggctccggcgaggacc
tgcggcaacggctccgtctgcagggactactggatcggccccagctacggcatcaccaac
ttcgacaacatcctcttcgctgttctcaccgtgttccagtgcatcaccatggagggatgg
gtggacatcctctacaacgcgaatgatgcttcagggaacacgtggaactggctgtacttc
atccccctcatcatcatcgggtccttcttcatgctgaacctggtgctgggcgtgctgtcg
ggggagtttgcaaaggaacgggagcgagtggagaagaggcaagaattcctgaagctccgc
cggcagcagcagattgagagagagttgacgggttacctggagtggatctgcaaagcagag
gaggtgatgctggctgaggaagacaagcatgcagaggagaagtcgctggatggagcatgg
tacaaaaagaaacacaacaactctgtgttgaaaaggactaaaaagagtaagaatgacctc
atcagtgcagaggagggcgacgaccacttcacagacatctcatctgttgctcccccaggg
tcaccgtttgcacgagcgagtgtgaagagcaagaacgagaactcctcttatttccggagg
aaagcgaagaggattcggttcaccacccgccgtctggtcaagtcccagagcttctactgg
acggtgttgtgtctcgttggcctcaacacgctgtgtgtagccatagtgcactacgaccag
cccgagtggctcacctacgcactctacctggctgagtttgtgttcttgggcctgttcctg
gctgagatgtccatgaagatgtacggcctcggcccccagaactacttccactcctccttc
aactgctttgattttggggtcatcatcggcagcatctttgaggtgatctgggctgccatc
aaacccggggcctcgttcgggatcagcgttctgcgagcactgagacttctccggatcttc
aaagtcaccaagtactggaactctctgaggaacctggttgtatccctgctcaactccatg
aagtccatcatcagcttgttgttccttctcttcctcttcatcgtggtcttcgctctgctc
ggcatgcagctgtttggcggccaatttaactttgacgatgaaacgccaacgaccaacttt
gacaccttcccagcagccattctcacggtgtttcagatcctgaccggggaggactggaac
gccgtcatgtaccacggcatcgagtcacaggggggagtgcacgggggaatgttctcctcc
atttacttcatcgtccttactctctttggaaactatacactcctaaatgtctttttggcc
attgctgttgataatcttgcaaatgcccaggagctcactaaggatgaagaagaacaggag
gaggccatcaacaagaagttggccatgcagaaggccaaggaggtgaaggaggtcagcccc
atgtcggctactaacatttccatcacagcgagttatgtctgcaccccagtccatcactac
ctgagtaaggagcagctaaggccagtgaagatgatatcagtgtgggagcagagggccaac
cagatgaggaaacagaactgggcgagctgtgaggctctgtacaacgaactggagtcagaa
gagcgtatccgcctgtcgtcggcccttcacatccggcctgacatgaagacccacctggac
cggcccctggtggttgagtccagcgacggggctctgcagggcggtcaccagcatcaccac
cacaagacctacacaccagaggaaggcaagactactaccgatccaccttcatctcctcgc
cattcccaccatcgccaccaccgccacccagacagaggtcgcgccaaatccaaggaggag
gccaacgacaacggtggccctgggaaggaggggaggcgccacgtccatcacattcgctcc
aaagagcacgactgcagccggagcaaagacggcaagagcgagaggtcacgtagtcgagag
ggaggcgggatgcagcaccatcagagttcagtggaggacggtggaggtagaggagtcacc
ggtgagaaacaccgtcatcatcactctcatcgacagtcccgagggggcaatgggacggtg
aacaacgatggaaagggagagcgaagatcccgtcgcaaagatggacgttcatctaacaga
gaggtggacaggaactccagaggccaaagtgtgactaatggagagagaaggaggcatcgc
actcatgggtcccggggccagaccacggctggaggagaggagcccacggagaaggagaag
atccacagtcacaggtttggtgactcggagggagactcgtcagccatctccccccagcag
gaaaccagtttcccggctgaccatccagaggactcggacaaccagaagaatattagaaga
accagccaatcctctgttcacattccccctgtgaccatcacctccccacctggagagacc
accctgatacaaatgaacagtattgactgtgaaatgatgcccatgaatgagaaggccctg
gaggatttgtgccaaacgggacccaaacccatcctgccgtacagttccatgttcatgttt
ggacagaccaatccggtgaggcggttatgtcactacattgtgactctgcggtattttgaa
atgtccatcctggttgtcattgccatgagtagcatcgctctggcagcagaggaccccgtc
tggactaacgcgcctcgcaaccaggtgctcaaatatctggactacgccttcactggtgtt
ttcacttttgaaatggtgatcaaaatggtggacctgggcctcctgctccatccaggatct
tacttcagagacctgtggaacatcctagacttcatcgtggtcagtggggccctggtggct
tttgccttttcgagcttcatgggtagatcgcagcaaggtgtgaccagggggactaaaggc
aaagacatcagcaccatcaagtccctgagggttctccgggtactccggcctctcaagacc
atcaagcgtctgccaaaactcaaggcggtgtttgactgtgtggtcaactctttgaaaaac
gtgctgaacatccttattgtttacatcctcttcatgttcatttttgcggttatcgcagtc
cagctcttcaaggggaaattcttctattgcaccgatgagtcgaaaggcctggagaaggac
tgcaaaggacagtttctggactacgacaaagaggaggtgtcagccatgcccagagagtgg
agaaagtacgagttccactatgacaacgtgctgtgggcgttcctcactctcttcaccgtc
tccaccggggaaggctggcccaccgttttgaagcactctgtggatgccacattcgaagac
gagggtcccagtcccggataccgaatagaaatctccatcttctacgtggtctactttgtg
gttttccctttcttctttgtcaacatctttgtggctttgatcattatcaccttccaggag
cagggagacaaagccctgtctgagtgcagcttggaaaagaacgagagagcttgtattgac
tttgccataaatgccagacctttgacgcgctacatgcctgagaacacgcagtccttccag
tacaggatgtggaagttcgttgtctcagctccattcgagtactctatcatgatcatgata
gctctcaacaccgtggtactcatgatgaagttccatggagctccagatttctatgaagcg
ttgctgaagaacctcaacattgtatttacgactctgttctctcttgagtgcattctgaag
atcattgcttttggtccactgaactacttgaaggacgcctggaacatgtttgactttgtg
acggtgttgggcagcatcacagacatcctagtcacagaaatcaatactacgaacaagctg
ctgaacctgagcttcctgagactgttcagagctgctcgcctcatcaagctgctgagacaa
ggctacaccatccgcatcctgctgtggacctttgtccagtcctttaaggccctgccgtac
gtgtgcctgctgatcgccatgctgttcttcatctacgccatcattgggatgcaggtcttt
ggcaatattgagctgaacgacgacacagcaatcactcaccacaacaatttccgcacgttc
ctccaggctctcatgctgcttttcaggagcgctaccggagaagcctggcacgagatcatg
ttgtcttgtctgagtcaccgagcctgtgatgagcaggcaggctctgggaaaacatgtggc
agtgattttgcttacttctactttgtctccttcatcttcctttgctccttcctgatgctg
aacctgtttgtggctgtcataatggataactttgagtaccttacccgagactcctctatc
ctagggcctcatcacctcgatgaattcattcgggtttgggctgaatacgacccagctgct
tgtggccgtatcaagtacctcgatatgtatcagatgctgctccacatgcccccaccctta
ggtttggggaagaaatgcccaccaagaatcgcctacaagcgcctcgtcaaaatgaacatg
cccattgctgatgacaccacggttcacttcacctccaccctgatggctctgatccgcacc
gcgctggagatcaaactggcctcaggaatggtcgtccagcgattgttggatgctcagtta
aagaaagagttgtctacagtttggcccaacctctcccaaaagagcatggatctgttggtg
acgccacacaagcccaatgagttgacggtaggaaaggtttacgctgcgctgatgatcttc
gactattacaagcagaatcgcgcgaggaggctgcagctgcagcagcacagcggctccaac
tcgcagtgcaaggtgggcgctctgtttaagcccttgctgcctctgactcacatgcaggag
agcaacatgataaacagtgaggttcctcccagcatgcctcagctccagaacaaacccaat
tccaaaccccatccactgaccagtcccagctccaactctctcaacaacaaaggcacaccg
tccagttatgatcacaggatcaggtcgtcatcgtcctgggggatggaaaagcacaaggaa
gtggaccgtgataaaatgaagaaaaccttgtctggggggccgtcagaggacactcccaac
accaccgtcattcaggagtcagtggaaatgaggaaaatggagaccagcatcagcagctcc
atcaccatccctgactcaggactggagagtcagagcagagcggcctccatgcctcgactc
agtgctgagacccagtccgtccatcacaccagcccgatgaggcactcggcctccgccgcg
gggccccagcggaggcccccagaggggaccctgcaggagcccgacccggagaaacctcgg
caggagcgggtccaccaccatcaccaccaccaccgctgccaccaccgccgagacagagac
agagacagagagaagaggcagaggtctctggacatgcctctggggggtcaactccctggc
tccgctggagttccaggagagccggtacctgacccagctgctgccagagacccggccccg
gaccgcggccgctcccaggacaggaaacaccaccactcctctgcagacaggcagcgctac
tactcctgcgaccgctactgcggccgggagcactgctccaccaagtctgctgccgccagc
tgcgccgtctcccccagcgagggcccggagcccaggaacccgcagggcagtggttgggtt
aaagacggtgtggtggctctgaactccagttctagcgcaccgagccgtggacgtcggcag
ctcccgcagaccccgctcaccccgcgacccggcgtcgcatacaagacttccacttcctcc
ccagtgcacagcgtgtccagccaggcgtcttggatccccagccggctgagccgcgacctg
tcggagcacacggccctccgccacggcggctcccaccactccccctgtcccgtcactcgg
atctgctccgagcccttcctgggccggggccatggagagaccccgggcagcccccacggc
agcctccaggaccagttggatgtcttccaggacacgccgtcacactcccccagctccagt
gccgggagttcatctcggaccacactgcctcgcgccatgggagccctactcccaactctt
ggtgtagagcttgacgtacccaacgggtaccacttcagtcttggggctgacaccagctca
ggctctggcaccaaggtccggaggtacaggaggtag
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