Cololabis saira (Pacific saury): 133450816
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Entry
133450816 CDS
T09849
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133450816
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133450816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133450816
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133450816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
NDNF
EGF
FN3_Tor_3rd
NDNF_C
hEGF
Motif
Other DBs
NCBI-GeneID:
133450816
NCBI-ProteinID:
XP_061585702
LinkDB
All DBs
Position
9:48593754..48892216
Genome browser
AA seq
1602 aa
AA seq
DB search
MKMKGFLFSCVTAAVLIEISTAGLVKKVIRHRREALMPKKTQENLTLPHPDQPVVFNHVY
NINVPSTSFCSVDLDSPGGTELKHKSTPVDMQNTEHMEHTVDGDNQIVFTHRINIPKQAC
GCENQLPDIKAILNRLEMLESELSSLREQCSSGAGCCGAQVTGEVSTKPYCHGRGNWSTE
TCSCLCEPGWKGPNCTEPECPNDCQDQGRCVDGRCECFGGFAGDDCSIEICLLDCGDYGH
CVEGSCLCEEGFIGEDCSQTNCLNNCLGRGRCEEDECICDYPWTGFDCSELICPNDCYDR
GRCDNGTCYCEEGYTGEDCGELSCPDNCNNRGMCVKGQCVCQMGYSGEDCSKLTCPKNCH
ERGHCFNGKCICDPGFEGEDCSIMSCPDNCSNNGHCNNGECVCDIGYQGEDCSELSCPNN
CLDRGRCVNGQCLCDQGFAGEDCSIKTCPEDCMGRGECVDGKCVCFVGFTGKDCGELTCP
NNCLNRGHCVNGQCVCHKGFTGEDCSEKTCPNNCGDRGYCVDGTCVCYEGFTGPDCSILT
CPADCHNQGRCENGMCICDEGFIGEDCSEVSPAKDLTVVEVTPETVDVSWENEMRVTEYL
ITYVPTAPGGLELDMQVPGAEKVATIRELEPGVEYLISVYAVLNNKKSVPVSARVATHLP
EPEGLKFKSVRETSVEVQWDPLDIPFDGWNLIFRNTKEDDGEILNSLGRPETTFEQSGLG
PGQEYEVKLEVVKNDKRGPPASKSVVTLIDAPSQVDVRDVSDTTALVTWFQPVASVDGVS
VSYGPSSNPSHRNVVELSSTDTQYHLGGLTPDTQYEVSLMAKRGEHTSIPVYDSFLTDLD
APRQLQTVELTDESITLEWKNSRAQVDNYRIKYGPLSGGEHGELLFPSGPKDSTQAKITG
LRPGTEYGMGVTAVKDERESLPTTTNAVTALDAPKDLTVTEVTETTMTLEWKRPLAKLDS
YRLVFVSADGYRVEDLVPGSSESHTLRGLTPGMLYTISITAERGRRNSIPATISAPTEEE
KPMVTNITVSDVSWESFLLSWSAEDGAFEAFLVEVTDAEVGTGWQNHTVPADARSLVISG
LSPSTWYRVSLYGVHKGVLLDPVFADTITDLGSPKGIRFSEVTDTSATVHWTTPRARVDS
YRVTYMPAHGGNANTLTVDGSDTHTLLSNLTPGVTYEVTIVAIKGQRESEPGSDSVTTAL
DKPRGLTAVNITDTEALLLWQPAIATVDGYVITYSADSVAPVMERVSGNVVEFEMNSLTP
ATHYTVKVYAVRDLAKSAATTTEFTTDVDAPQDLAASNIQTENALLTWKPPRADITGYIL
SFESAGGAIREVVLSPTAVSYNMAQLSASTEYVVRLKALAGPKRSRVIKTVFTTTGVLYR
HPRDCSQALLNGDTSSGFYTVYLGGDESQPLQVFCDMTTDGGGWIVFLRRQSGRLEFFRN
WKNYTAGFGDMNDEFWLGLSNLHKITAGGQYELRVDLRDKGETAYAQYDKFSVSEPRTRY
KVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIAVTNCALSYKGAFWYKNCHRVNLMGRYG
DNSHSKGVNWFHWKGHEHSIEFAEMKIRPSNFRNLEGRRKRS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaggcttcctctttagctgcgtaacagcagctgtacttattgaaatttca
actgctggcctggtcaagaaggtcatccgtcaccgtagggaggctctgatgcccaagaaa
acacaggagaacctcaccctaccccatcctgaccagccagtggtgttcaaccatgtctac
aacatcaacgtcccctccacttccttctgctccgtggaccttgactcccctggaggcacc
gagctcaagcacaagagcaccccagtggacatgcagaacacggagcatatggaacatacg
gtggatggtgacaatcagatcgtttttacccaccgaatcaatatccctaagcaagcatgt
ggctgtgaaaaccagctgccagacatcaaagccatcctgaacagactggagatgctggag
tctgagctgtctagtttaagggagcagtgcagcagtggagcaggctgctgtggggctcaa
gttacaggtgaagtgtcaacaaagccctactgtcatggacgtgggaactggagcaccgag
acttgcagctgcttgtgtgaacctggttggaagggccccaactgtacagagcccgagtgt
cccaacgactgccaggaccagggccgctgtgtggatggtagatgtgaatgctttggaggt
tttgctggggacgactgtagcattgaaatctgcttgctggactgcggtgactacgggcac
tgtgttgaggggtcctgcctctgcgaagagggcttcattggtgaggattgttcccagact
aactgcctcaacaactgcctgggccgtggtcgctgtgaggaggatgagtgcatctgcgac
tatccgtggacgggctttgattgctctgaactcatctgtccaaatgactgctatgaccga
ggacgctgcgacaacggaacctgctactgtgaagaaggatacactggagaggactgtggt
gaactcagttgtcctgacaattgtaataaccgtggcatgtgcgtgaaaggccagtgtgtg
tgtcagatgggctatagtggagaggactgctcaaagctcacctgtcccaagaactgccat
gagcgaggccactgctttaatgggaaatgtatctgtgatcctggatttgaaggagaagat
tgctccatcatgtcatgccctgataactgtagcaacaatggccattgcaataatggagaa
tgtgtttgcgacataggataccaaggtgaagactgcagtgagctctcttgccctaacaat
tgcctagaccggggccgctgtgtcaacggacagtgcttatgtgaccaaggttttgctggg
gaagactgcagcatcaagacctgtcctgaagactgcatgggacgaggagaatgtgtggat
ggaaagtgtgtgtgctttgtaggctttacaggcaaagactgtggcgaacttacctgtccc
aacaactgtctgaaccgaggtcactgtgtgaatggacagtgtgtctgtcataagggtttc
actggtgaggactgcagtgagaagacatgtcccaacaactgtggagacagaggttattgt
gtcgacggcacctgcgtgtgttatgagggcttcaccggtccagactgctcgatactgacc
tgcccagcagactgccacaaccaagggcgctgtgaaaatggaatgtgtatatgtgatgag
ggcttcattggagaggactgctctgaggtgtcaccagcaaaagatctaactgtggtggaa
gttaccccagaaacagtggacgtatcctgggagaatgagatgcgcgtcacggagtacctt
atcacctacgtgcccacggctccagggggtctggagctagacatgcaggtgcctggggca
gagaaggtggccacgattcgagagcttgagcctggtgttgagtatctcatcagtgtctat
gctgtcctcaataataaaaagagcgttcctgtcagtgcgagagtggcaacacatcttcct
gaacctgagggtcttaagttcaagtcagtgcgggaaacatcagtggaggtgcagtgggat
ccattggatattccctttgatgggtggaatctcatcttcagaaacacaaaagaggatgat
ggtgagattcttaactcccttggccgcccagaaaccacctttgagcagtcgggcctgggt
ccaggtcaggagtacgaggtgaagctggaggtggtgaaaaacgacaagcgtgggccacct
gcctccaagagtgttgtcacattgattgatgcccccagccaggtggatgtccgtgacgtg
agcgacaccacggccctggtgacctggttccagcctgtggccagcgttgatggggttagc
gtctcctatggacccagctctaacccttctcatcggaatgtggtagagctgtcttccact
gacacccagtaccaccttggaggccttacgcccgacacccagtatgaagtgtctctgatg
gcaaagaggggagaacataccagcatccctgtgtatgactccttcctaacagacctggat
gctcccagacagctgcagacggtagagctgacggacgagagcatcactctagagtggaaa
aacagccgcgctcaagtggacaactaccgcatcaagtatggacctctttctggaggggag
catggagaacttctctttccctctggacccaaggactccacccaggctaagatcactggc
ctaagaccaggaaccgagtatgggatgggtgtgactgcggtgaaagatgagagggagagt
ctgcccacaaccaccaacgcagtgacagctctggatgctcccaaagacctgactgtaaca
gaggttaccgaaaccaccatgacactggagtggaaacgtcccctggccaaactggactcc
tacagactggtctttgtttcagcggacggctacagggttgaagacttggttccaggcagc
tctgaatctcacaccctcaggggcctgacccctggcatgctgtacaccatcagcatcacc
gcagagaggggccggagaaacagcatacctgccaccatttcagctcccacagaggaggag
aaaccaatggtgactaacataactgtcagcgatgtatcatgggagagcttcctgctgtcc
tggtctgctgaggacggggcattcgaggcttttctggttgaggttacggacgcagaggta
ggcactgggtggcagaaccacactgtgcccgctgatgctcgcagtctcgtcatctctggc
ctctcccccagcacctggtacagggtgagcctgtacggggtgcacaagggggtcctgtta
gatcccgtctttgcagataccatcacagacctgggctcacctaagggcatccgtttctct
gaagtgacagatacatctgccactgttcactggacgactccaagagctcgggtggacagc
taccgggtgacctatatgcctgctcatggaggtaatgctaacacgctgacagtggacggc
tccgatactcacaccctgctgtcaaacctgacacctggggtcacttatgaggtcaccatc
gttgccatcaaaggtcagagagagagtgagccaggatcagacagtgtcaccacagctctg
gacaaaccccgcggtctgactgcagtcaacatcacagacactgaagcgttgctgctctgg
caacctgccatcgctacggtcgacggttatgtcatcacatacagtgcagattctgtggct
ccagtgatggagcgtgtttcaggaaacgtggtggagtttgagatgaactctttgaccccg
gcgacccactacactgtgaaagtttatgcagtgagggacttggcaaagagtgcagccact
acgacggagttcacaacagacgtggacgccccgcaggacctggcagccagcaacattcag
acagaaaatgccctgctcacctggaagcctcctcgcgctgatatcaccgggtacatcctc
agcttcgagtcggcaggcggtgccatccgggaggtggtcctgagtcccactgcagtgtcg
tacaacatggcccagctcagcgcctccacagagtatgtagtccggctaaaggccctggct
ggtcccaagagaagcagagtcatcaaaactgttttcaccaccactggtgtgctgtacaga
catcccagagactgctcccaggccctactgaacggtgacacttcgtcagggttttacacc
gtctacctggggggagatgagagccagcccctgcaggtcttctgcgacatgaccaccgat
ggaggtggatggattgttttcctccgacgtcaaagtggccgactggagtttttccgcaac
tggaagaattacacagccggcttcggagacatgaatgatgaattctggcttggtctctcc
aacttgcataagattacagctggaggtcaatatgagctccgagttgacctgagagataag
ggagagacggcctacgctcagtacgacaagttttctgtgtctgaacctcggacccgctac
aaagtccatgtaggagggtacagcgggacagcaggagactccatgacctaccaccacgga
cgtccgttctccacatatgaccacgacaacgatatcgctgtcactaattgtgctctgtcc
tataagggagccttctggtataaaaactgccaccgggtcaacctgatgggacgatatgga
gataatagtcacagcaagggagtgaactggttccactggaaaggccacgagcactcgatt
gaatttgccgagatgaaaattagaccatctaacttcagaaacctggaaggaaggaggaaa
agatcataa
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