Cololabis saira (Pacific saury): 133450825
Help
Entry
133450825 CDS
T09849
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133450825
04121 Ubiquitin system [BR:
csai04121
]
133450825
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
133450825
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
133450825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Tmemb_cc2
Motif
Other DBs
NCBI-GeneID:
133450825
NCBI-ProteinID:
XP_061585714
LinkDB
All DBs
Position
9:34481382..34484058
Genome browser
AA seq
543 aa
AA seq
DB search
MPTTSASPKPSTSRQGSLTDLFESITPYEHNSKRHAEITLAITEFIAKDMMPIRVVTTPG
FIDLVRTLDKRYRMPSRTHFSQVAIPALYKKCRQRVAAELKTVEFFATTTDLWSSRTTEP
YQSLTVHFIDQDLKLKARCLQVSYFPDDHTGENIAAGLREGLAGWDLPEENHVCITTDNA
ANMVLAAQLNDWTRLQCFGHRLHLAIGHALKDDRVSRAVGLCKKVVGHFSHSWKKKAAMS
EAQRELKLPEHSLITECPTRWGSKEMMIARVLEQLKAISQVLSGDRYARSLIPTWQDIDV
LESIHKALHPLLDFTDALSGEEYVSISYLKPVLHLLATSILAEDQEDTDLTRSIKNKVLA
YLNEKYKDPIIQELLDVASFLDPRFKTRYITADNIPTVKTRLKTEMLESARRAYNQEKRS
RTESTQSAQPSGEKVKKSLGSFFKTAVASSASPVQPEDVAEAELNSYLMTPAIDGEDDPL
AWWKVHKINFPRLCNMARKYLCVPATSAPSERLFSAGGNIVTCTRSSLKPAKVDMLVFLA
KNL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgaccagtgcttcacctaagccaagtaccagccgacagggatccctgaccgac
ctgttcgagagtattactccttacgagcataactcgaagcggcacgcagaaataactctg
gcaataacggagttcatagccaaggacatgatgcccattcgtgtagtgaccacgcctggg
tttattgatttggtacgcacactggataagcggtaccgaatgccgtcacgcacacatttt
agccaggtagccatacctgcgctatataaaaaatgcagacagagagttgcagcggagctg
aaaacagtggagttttttgcaacgacaactgatctttggtcaagccgcacaacggagcca
taccaaagtctaacggtgcattttatcgaccaagacttaaaactcaaggcgcgctgtctt
caagtgtcctatttcccggacgaccacacgggagaaaacattgcagccggcctgagagag
ggtctcgccggctgggatctaccggaagaaaaccacgtctgcataacgacggacaacgca
gctaatatggtgctggcagcacagctgaacgactggaccagactgcagtgttttgggcac
agattacatcttgccatcggacatgcactcaaagatgacagagtgtcaagagcagtaggg
ctgtgcaagaaggtggtggggcacttctcccacagttggaagaagaaggcagcaatgagt
gaagcacagagggagctcaaacttcctgagcacagtcttattactgaatgcccaacaaga
tggggatccaaggaaatgatgattgccagggtgctagagcagctcaaagccatttcgcag
gtgttgtccggtgaccgatacgcacgctccctcatcccaacctggcaggatattgacgtg
ttggagtctattcacaaggcactgcatcctctcctggactttacagatgctctctcagga
gaggagtatgtgagcatctcctacctcaaaccagttcttcaccttctagccacatcaatc
ctggctgaagatcaagaggacactgacctgactaggtcaatcaaaaataaggtcctggca
tacctcaatgaaaagtacaaggaccccatcatccaggagcttttggatgttgcatccttc
ctggatcccaggtttaaaacccggtacatcactgcggacaacattcccaccgttaagaca
cgactcaagactgaaatgttggaatcagcaaggcgtgcatataaccaggagaagaggtct
cgaaccgaaagcactcaaagtgcacagccctctggcgagaaggtgaagaagtctcttggc
agcttcttcaagactgctgtggcctcttctgcttctcccgtgcaacctgaagatgtcgct
gaggcagagttaaatagttacctcatgacccctgccattgatggagaagatgaccccttg
gcctggtggaaggtgcacaagatcaactttccacgactgtgcaatatggcccgcaagtac
ctctgtgtccctgccacaagtgctccttcagagcgtcttttcagtgctggagggaatatc
gttacttgcactcgctcatctttaaaaccagcaaaagttgacatgctggttttcctggca
aaaaatctgtga
DBGET
integrated database retrieval system
