Cololabis saira (Pacific saury): 133450977
Help
Entry
133450977 CDS
T09849
Symbol
prdm8b
Name
(RefSeq) PR domain zinc finger protein 8b
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133450977 (prdm8b)
03036 Chromosome and associated proteins [BR:
csai03036
]
133450977 (prdm8b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133450977 (prdm8b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
133450977 (prdm8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
Zf-C2H2_ZNF451_C
DUF5810
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
133450977
NCBI-ProteinID:
XP_061585872
LinkDB
All DBs
Position
9:18819428..18825387
Genome browser
AA seq
562 aa
AA seq
DB search
MEESGSQKLAWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFVAL
KATDKRTAPYIFRVDTSAANSTSEGLMWLRLVQSARDREEQNLEAYVKNGQLFYRSLRRI
EKDEELLVWYGKDLIDLLLLNSSRAPPKGKGSSHYVCPDCSQRFQFEFPFLAHLRFRCTK
RLQSIAGGDEEPGKDGGSERPSTPPPRSSPKHGRSDGFGSTQDSNKPATDFHNLARDLEN
NRTSPPSDKEAEVCSESSRKRKFSEERECRGPGLVPSKSKDELATSAQNYRGAYGLEENQ
RSFSPPGPTEPPQAKRSAFTEVKKSPQNLKHHGGGKNLQNAENKDGGRPGGNPPDKPLSI
RQVLSETQPPQPSPMGSAFTSVGQPGGGERKSAFSQPSRSFSQISPLVMPPKLLDCHPAV
GDTISSSRLYQADHLAAKLQGAELGANCPVPGGMGKQNPFVYATTFWPKNTGAIQLQMPS
ALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEFAMEPLVKRRREEKLK
CPICNESFRERHHLSRHMTSHN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtccggttcccagaagttggcgtgggacggggacgcgaaggcggtgcagcag
tgtctcacggacatcttcaccagcgtgtacacgacgtgcgacatcccggagaacgccatc
ttcgggccgtgcgtgctgagccacacgtcgctgtacgacagcatcgccttcgtcgcgctc
aaggccacggacaagcgcacggcaccctacatcttcagggtggacacctcggcggccaac
agcacctcggagggcctgatgtggctgcggctggtccagtcggcccgggaccgagaggag
cagaacctggaggcctatgtgaagaatggccaactcttctaccgctcgctacgccgcatc
gagaaggacgaggagctgctggtgtggtatggcaaggacctgatcgacctgctgctgctc
aactccagcagagcgccgcccaagggcaaagggtcgtcccactacgtctgccccgactgc
agccagcggttccagttcgagttccccttcctggcgcacctccgtttccgttgcaccaag
agactgcagagcatcgccggcggcgacgaggagccgggcaaagacgggggcagcgagcgg
ccgagcacccccccacccaggtccagccccaagcacggccgctccgacggattcggcagc
acgcaggacagcaacaagcccgccacggactttcacaacctggccagggacctggagaac
aaccggaccagcccgccgagcgacaaggaggctgaggtctgcagcgagagctccaggaag
aggaagttctcggaggagagggagtgccgaggacccggcctcgtaccgtccaagtccaag
gacgagctcgccacgtctgctcagaactacaggggggcctacggcctggaggagaaccag
cggtccttctcgccgccgggcccgacagaacctccacaggccaagcgcagcgccttcacg
gaggtcaagaagtcgcctcagaacctcaaacaccacggtggtggcaagaacctgcagaac
gctgaaaataaggacggcggccgccccggcggcaaccccccggacaagcccctcagcatc
cggcaggtgctgtcggagacgcagccgccccagccctcgcccatgggcagcgccttcacc
tctgtcggccagccagggggcggcgagaggaagagtgccttcagccagccgtctcggtcc
ttctcgcagatctcgccgctggtgatgccgccgaagctgctggactgccacccggcggtg
ggcgacaccatctcctccagcagactctaccaggccgaccaccttgccgccaagctgcag
ggggcggagctgggtgccaactgccccgtgccgggcggcatggggaagcagaaccccttc
gtgtacgccaccacattctggccaaagaacacgggcgccatccagctgcagatgccgtcg
gcgctgacactgctgccgccctccttcacctcgctctgcctgccggcgcagaactggtgc
gccaagtgcaacgcctccttccgcatgacctcggacctggtttaccacatgcgctcgcac
cacaaaaaggagttcgccatggagccgctggtcaagcgacggcgcgaggagaagctcaag
tgccccatatgcaacgagtccttccgggagcggcaccacctgtcacgtcacatgacctcc
cacaactga
DBGET
integrated database retrieval system
