Cololabis saira (Pacific saury): 133451005
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Entry
133451005 CDS
T09849
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133451005 (tmc1)
03037 Cilium and associated proteins [BR:
csai03037
]
133451005 (tmc1)
Transporters [BR:
csai02000
]
Other transporters
Pores ion channels [TC:
1
]
133451005 (tmc1)
Cilium and associated proteins [BR:
csai03037
]
Other cilia and associated proteins
Stereociliary proteins
133451005 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
133451005
NCBI-ProteinID:
XP_061585909
LinkDB
All DBs
Position
9:complement(22830823..22838495)
Genome browser
AA seq
811 aa
AA seq
DB search
MVKKVQAAKKKKRKKVVETSSEQETSEEEDSKEEVNEDEQLRPECLSPEELEKLKEAVDE
RKKLVQSLRGKPWPMKKKLVTLRESQEFVEKYEGALGKGKGRKLYAYKVMMTKRWMKFQR
DFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMG
RPYGSIPRKTVPRAEEAGAMDFAVLWDFGGYARYSVLFYGYYNNQHAIGWLKFRMPLSYF
LVGVGTVAYSYMVVIRTMARNANESGVGDDNSFNFCWKMFTSWDYLIGNAETADNKFASI
TTSFKEAILEEQENQKDDNIHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGL
ENHTWWERNEVNMVMSLLGMFCPMLFDVISTLENYHPRVALQWQLGRIFALFLGNLYTFI
IALMDEINLKREEEKIIKFNITMWEASLYNGTASENSTTPLITIHPADVPRGPCWETMVG
QEFVRLIISDTMTTYITLLIGDFLRAVLVRFLNHCWCWDLEAGFPSYSEFDVSGNVLGLI
FNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLL
VILFLSTLPAIYTIVTIPPSFDCGPFSGKNRMFDVIHETLESDFPAWFSKVFSYASNPGL
VLPFILLMVLAIYYLHSTSKSYKEANVELKKKLQLQNEENKKKNKRAALKAQTDLEEARK
TTSQAAERQKNNNASLRSQEEYEENYAKSQRLCHSKNGRNPTFSGEDRQHQVTARVSRNY
HHGNHETHGYLPGFSQQSEPRICRVPSLQRH
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaaagtacaagcagcaaagaagaaaaagcggaagaaagttgttgaaacaagc
tcagaacaagagacaagtgaagaagaagacagcaaagaggaggtcaacgaggacgagcag
ttgaggccagagtgtttgtcaccggaggagttggagaagctgaaggaggcagtggatgag
aggaagaaactggtccagagtcttaggggaaaaccctggccaatgaaaaagaaacttgtc
actttacgagagtctcaggagtttgtggagaaatatgagggagctttggggaaagggaaa
ggcaggaagctctatgcgtacaaggtcatgatgacgaagaggtggatgaagttccaacga
gactttgaaaatttcaaaaccgcctgcattccctgggagatgaaaataaaggagattgaa
agtcattttggctcctcggtagcctcgtacttcatcttcctgaggtggatgtatggcatc
aatatgatcttatttggtctgacctttggcctggttatggtgccagaggcattaatgggg
cgaccctatggcagcatccccagaaagacagttcccagagccgaggaggccggtgccatg
gactttgctgtcctgtgggattttgggggttatgctcggtattctgtcctcttttatgga
tactacaacaaccagcatgccatcggctggctcaagttccgcatgcctctgtcatatttc
ctagttggtgtgggaaccgtggcctatagctatatggttgtcataagaacgatggcccgt
aatgcaaatgagtcaggggttggagatgacaacagcttcaacttttgttggaagatgttc
actagctgggattacctgataggaaatgctgaaacggcagacaataagtttgcgtctatc
accactagcttcaaggaggcaatcctagaggagcaagagaaccagaaggatgacaacatc
catttgactcgtttcctacgggtgttggcaaacttcctggtcttgtgctgtctagcagga
agtggatatctcatttattttgtggtgcggcgctctcagaagtttgccctggatggtctg
gaaaatcacacctggtgggaaagaaatgaggtgaacatggtcatgtcactgctgggcatg
ttctgccccatgctgtttgacgtcatcagcaccctggagaactaccaccctcgtgttgcc
ctgcagtggcagctgggtcgcatttttgccctctttttgggaaacctctacaccttcatc
attgctctcatggatgagattaacctgaaaagagaagaggaaaagataattaagtttaac
ataaccatgtgggaagccagtctttacaacggcacagcatcagaaaactccaccactcca
ctcatcactatccaccctgctgatgttcccagagggccctgctgggagaccatggtgggg
caggagtttgtcaggctgataatatctgatacaatgacaacttacatcacgctgctgatt
ggggatttcctgagagctgtgctcgtccgattccttaaccactgctggtgctgggacctt
gaggctggatttccatcctactctgagtttgatgtcagtgggaatgtcctgggccttatc
ttcaatcaaggaatgatatggatgggtgctttttatgccccctgcctgcctgccttgaat
gtcctgcggctccacgtgtccatgtacctgcagtgctgggctgtgatgtgctgtaacgtg
ccgcaggaaagggtcttcaaagcttcgggctccaataacttctacatggctatgttactg
gtcatcctctttctgtccactctgcctgccatctacaccatcgtcaccatcccaccttcc
tttgactgtggaccatttagtggcaagaaccgcatgtttgatgtgatccatgagacgttg
gagtctgacttccctgcctggtttagtaaagtgttcagttatgcatcgaaccctgggctg
gtgttaccctttatactgctaatggtactggctatttattacttgcattccacatccaaa
agctacaaagaagctaatgtggaactgaagaaaaaactacaactgcaaaacgaagaaaac
aagaagaagaacaaacgagcagcactgaaggcacaaacggatctggaggaagccagaaaa
acaacatcacaggctgcagagcgtcaaaagaacaacaatgcttcactaagaagtcaggaa
gaatatgaagagaattatgccaaaagtcagaggttgtgtcacagtaagaacggacgtaac
cctactttctctggtgaagacagacaacaccaagttacagccagagtctcgaggaactat
caccatggcaaccacgagacccatggatacctgcctggtttctcccagcaaagtgagccc
aggatatgtagggtgccgagcttgcagagacactag
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