Cololabis saira (Pacific saury): 133451032
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Entry
133451032 CDS
T09849
Name
(RefSeq) DNA repair protein XRCC4-like isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
133451032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133451032
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
133451032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
DUF7783
UPF0242
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
133451032
NCBI-ProteinID:
XP_061585939
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Position
9:complement(27747259..27773420)
Genome browser
AA seq
294 aa
AA seq
DB search
MSGTVHQIALSTKPGIPYFLRVDWAHCLGAGFTLALTDGSSAWIGEVSEDEMTREATDMG
VSRDKYVEDLLQALTKSEGRQEGGKDAFSFHLTPDHHYLSYEKICNNISVQLGSVAIQPA
PDPLDLIREMITQSLKHSTNLKTENSQLLEDNHRLRQDHRQIIKELEERVQEKETLEREL
YSRFVMVLNEKKAKIRSLQDVVQQIRQSDDRQRHEEGAQSDNGRTQGEEGSEDRGEETVQ
SIHPSQESTILITGHNLVAHGISIEQPFSDDEDEEPARKLRLRRSPSPHSSKKR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtacagttcaccagatagctctaagcactaaacctggcatcccctacttcctg
cgagttgactgggcccactgcttgggtgctgggttcaccttagctctcactgatggcagc
tcagcatggattggggaagtttcagaggatgagatgacaagggaggccactgacatggga
gtttcaagggacaagtatgttgaggatcttctgcaagctttaacaaaaagtgaaggaagg
caagagggcggcaaggatgcgttttctttccatctcacaccagatcaccattatctttct
tatgaaaagatctgtaataatatttcggtgcagttggggtctgtggcgatccaaccagct
ccggaccctctcgatctcatcagagagatgatcacccagtccctaaagcacagcaccaat
ctgaagacagaaaactcgcagttgttggaggacaaccacagactgaggcaggatcaccgg
cagataatcaaagagctggaggagcgggttcaggaaaaagagactttagagagggagctg
tactcacgttttgtcatggtgctgaatgagaagaaggccaagatcagaagcctccaggat
gttgtccaacagatccgccaatcagacgaccggcagagacatgaagaaggagcacaaagt
gacaatggcagaactcagggtgaagaaggcagtgaggacagaggagaagagactgttcag
agcatccatccatcccaggagtcaaccatcctcatcacaggtcataatctggtggcgcat
ggtatctctattgagcagcctttttccgatgatgaagatgaagagccggcacggaagctg
aggttacgtcgctccccgagtccccactcttctaaaaagagatga
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