Cololabis saira (Pacific saury): 133451044
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Entry
133451044 CDS
T09849
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133451044 (tfip11)
Spliceosome [BR:
csai03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133451044 (tfip11)
Other components
Complex C specific factors
133451044 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
133451044
NCBI-ProteinID:
XP_061585955
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All DBs
Position
9:complement(28722543..28727880)
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AA seq
831 aa
AA seq
DB search
MSMSHLYGRREEEDEGVEVESFEVTDWDLANEFNPERHRFRQTKEQATYGIWAERDSDED
ERPSFGGKRSKDYTTPVNFVSAGLRKSAAEEKQQKEEGSDDSDEDAPAPPPPPRGGAPKK
LQMGNFRGNQSQRFAGGVQSGQGIGSWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGIINP
IEAKLRKGKGAVGAYGNERTQQSLQDFPVADSEDEEEKEFRKELGQWRKDPAGSGAKKKP
KYSYRTADELKAKGKIAGRSTTASAGELAQVKVIDMTGREQKVYYSYSQISNKHSVPDET
TPSMSTRDQKGSGFGLPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRALQS
RLDTEKDAIQRMEAVLALVECFPSGETAPGEGPTLQECARIFDTLQTDYYEEYKTMGLGD
LAVAVVHPLLKERLSSWDPLKDSSFCLEDIGQWRVVLESRDLHSSGPGSNMDPYHRLLWE
VWIPVMRSCVSGWQPRMVGPMVDCVEMWAALLPLWILDHLLEQLILPRLQREVDSWNPLT
DTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDASARLILQPWKNVFTAGA
WEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLMSLLDKNFFTKWL
QVLCSWLSNSPNYEEITKWYLGWKSMFSDVLLAQPLIKEKFNEALDIMNRAVSSGMGGYM
QPGARENIAYLTQTERRKDFQYEALQERRDAETVAHRGISAGVPTNFKDLIQTKAEENNI
VFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtctcatctttatggtcggagagaggaggaggatgaaggggtggaggtggag
agctttgaggtgactgactgggatctggccaatgagttcaacccagagcgccacagattc
agacagactaaagagcaggccacctatggtatctgggctgaaagagattcagatgaagat
gagagacccagctttggtggcaaacgatctaaagattacacaactccggtgaactttgtt
agtgctggtttgcgtaagtctgcagctgaggagaaacagcaaaaagaagaaggatcagat
gattctgatgaagatgctcctgcaccacctccccctcctcgtggtggcgcacccaaaaag
cttcaaatgggcaatttccgtgggaatcagtcacagcggtttgcaggtggtgtgcagtct
ggacaaggcattggaagctgggagaagcacacaaagggaattggacaaaagcttctgcag
aaaatgggataccagccaggaaaaggcctgggcaaaaatgctcaaggtattattaacccc
attgaggccaagcttcgtaaaggaaagggtgcggtgggtgcatatggcaatgagcgaacc
caacagagtcttcaggactttcctgtagctgactcggaagacgaggaggaaaaggagttt
cggaaggagctaggtcagtggcgtaaggatcctgcgggatctggggcaaagaagaaaccc
aagtactcatacagaactgcagatgaactgaaagctaaaggcaaaattgcaggtcggagc
acaacagcaagtgcaggagagctggcacaagttaaggtaatagatatgactggaagagag
caaaaagtttactacagttacagtcagatatctaacaagcacagtgttcctgatgaaaca
acaccgagcatgtccactcgggatcagaagggatccggttttggtctacctgagctggag
cacaatctacagttgttgatagatctcacagaacaggacatattgcagtctgcccgacgt
ctgcagcatgaaaaggatgtagttgtgtctcttagccatgagtcaagagcattgcagagc
agactggatacagagaaagatgctatccagagaatggaggccgtacttgcgctggtggag
tgttttccttctggcgagacggcaccaggagagggacccaccttacaggagtgtgcccgg
atctttgacaccttacaaactgattattatgaagaatacaagacaatgggattgggtgac
ctggctgtggctgttgttcatcctttgcttaaagagagactttcttcatgggaccctcta
aaggacagctctttttgtctggaagacatcggtcagtggagagtagttcttgaatccaga
gaccttcactccagtggcccaggttctaatatggacccttaccacagactgttgtgggag
gtgtggatccctgtgatgcgatcttgtgtgtccggctggcagcctcgtatggtgggtcct
atggtggactgtgtggaaatgtgggctgctcttctaccactctggatcttagatcacctg
ttggagcagcttatcttacctcgactacagcgagaggtggatagctggaaccctttaact
gacacagtcccaatccactcatggatccacccttggctgcctctactccagtcacgttta
gagcctctttacccaccaataaggagcaaactatccaatgctttgcagcgttggcatccc
agtgacgcctcggctcgtctcatcctacagccatggaaaaatgtcttcacagcaggtgca
tgggaagctttcatggtgaaaaacatcatccctaagctagcattatgcctggaagagctg
gtcatcaaccctcaccagcagcagatggagccatttcactgggtgatggactgggagggc
atgctgtctccctccagcctgatgtccctgctggacaaaaactttttcacaaaatggttg
caggttctgtgttcatggctgagcaacagtcctaactatgaggaaatcactaaatggtat
cttggttggaaaagcatgtttagtgacgtcttgttggcacagcccctcattaaagagaaa
ttcaatgaagctttggacatcatgaatcgggcagtgtcttcaggaatgggtggatatatg
caacccggtgcaagagagaacattgcctatctcacacagacggagagacggaaggacttc
cagtatgaagcgttgcaggagcgcagggatgctgagactgtggctcataggggcatcagc
gctggtgtaccaactaactttaaagatcttatccaaactaaggcagaggagaacaacatt
gtcttcatgcctttagtagccaaacgacatgagggtaaacagctgtacacatttggacgc
attgttatctacatagacagaggggttgtctttgtacaaggagagaagacttgggtgccc
acatctttgcagagtttgatagatatggcaaaatga
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