Cololabis saira (Pacific saury): 133451190
Help
Entry
133451190 CDS
T09849
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04020
Calcium signaling pathway
csai04080
Neuroactive ligand-receptor interaction
csai04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133451190
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133451190
04082 Neuroactive ligand signaling
133451190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133451190
Ion channels [BR:
csai04040
]
Ligand-gated channels
Glutamate (ionotropic)
133451190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
133451190
NCBI-ProteinID:
XP_061586140
LinkDB
All DBs
Position
9:42881776..42968433
Genome browser
AA seq
905 aa
AA seq
DB search
MELRGGLLLAVLQCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGRDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSQDTNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPGRHVQVGIFNGSQVIMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKTDGTCKEEYTVNGVLIKKVICTGPNGTTPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPS
VSTVV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggaactccgtggcggtctcctgctggccgtcctgcagtgctgctcggtggcgctgtgc
ggctgcgagccccgcctggtcaacgtgggtgccgtgctgagtcagaagcgctacgagcag
gtgttcaaggaggcagtgagtcaggccaatgcgctgtacggccgggacaagttcaagatg
aatgccatttctgtcacgcacaagcccaacgccatccagatggcgctgtccgtctgcgag
gacctcatctccaaccaggtgtatgcgatcctggtcagccatccgccgcaatccaacgac
cacctgactccgacacccgtctcctatacagccggcttctaccgcatccccgtggttggt
ctgacgacacgcatgtccatctactctgacaagagcatccacctgtcgttcctgaggacg
gtgccgccgtactcccaccaggcgcaggtgtggttcgacctgatgagagagttcagatgg
aatcacatcatcctgatcgtcagcgacgaccacgagggccgagccgctcagaagaggctg
gagacgctgctggaggagcgcgagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacccaaggcggagaaggtgctgctattcagccaa
gacaccaacctgacggcactgctgctggaggccaaggacctggaggcccgggtcatcatt
ctctcagccagcgaggatgaagctgctgctgtctacaaagccgcccggcagctcaacatg
acggggtctggttacgtctggctggttggagagagggagatgagcggtaaagctctgagc
gaagctccagacggcctgctgggcctccagctgatcaacggtaagaacgagtcggctcac
atcgcggatgcggttgccgtggtggctcagtctctgcaggagctgtttgagaaggagaac
atcacggagccgccgcggggctgcgtgggaaacaccaacatctggaggaccgggccgctc
ttcaaacgggtgctaatgtcatcaaaataccctgacggcctaacaggtcggatcgagttc
aacgatgacggtgaccggcgctttgccacctacagcatcttgaactaccagcagaaacct
ggtcgccacgtccaggtcggaatcttcaacggatctcaggtcatcatgaaccctcagagg
aagatcatctggcccggaggagagacggagaaaccagttggataccagatgtcgaccaaa
cttaagattgtgacgatccaccaggagccgtttgtttacgtgaaaccaacaaagacggac
gggacctgtaaagaagaatacaccgtcaacggagtcttgatcaagaaggtgatctgtacc
ggacccaacgggaccacaccaggtcagcccatcgtccctcagtgttgctatggtttctgc
atcgacctgctcatcaagctggccatgagcatgaacttcacctacgaggttcacttggtg
gctgatgggaagtttggcacgcaggaacgagtgaacaacagcaacaagaaggagtggaac
gggatgatgggggagctgcttggaggcctggccgacatgatcgtggcccccctcaccatc
aacaacgagcgcgctcagtacatcgagttctccaagcccttcaagtaccaggggctcacc
attctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccag
agcacactgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ttagaccggttcagcccgttcggaaggttcaaagtgaacagcgaagaagaagaagaagac
gccctcaccctgtcctccgccatgtggttctcttggggagtcctgctgaactctgggatc
ggagaaggagctcctaggagcttctccgccaggatcctggggatggtgtgggcagggttt
gccatgatcatcgtggcatcgtacactgccaatctggcagccttcctggtgctggaccgg
cctgaggagcgcatcactggcatcaacgaccccaggctgcgtaacccttcagataagttc
atctacgccacggtgaagcagagctcggtggatatctacttcagacggcaggtggaactg
agcaccatgtaccggcacatggagaaacacaactacgagagcgccgctgaggcaatccag
gccgtccgagacaacaagcttcacgccttcatctgggacagcgctgtgttggagttcgag
gcgtcgcagaagtgcgacctggtgacgacgggagagctgtttttccgatccgggttcggg
atcggaatgaggaaggacagtccgtggaaacagaacgtttctctggcaatcctaagttct
catgagaatggcttcatggaggatctggacaagacgtgggttcgatatcaggagtgtgac
tccaggagcaacgcacctgccaccctcacctttgagaacatggcgggtgtgttcatgctg
gttgctggcggtatcgtcgcagggatattcctcatattcattgagattgcctataaacgc
cacaaagacgcacggaggaagcagatgcagcttgcctttgccgcagtgaacgtgtggagg
aagaacttgcagccgtacccgactgacatcactggccagctcaacctatcagatccctcc
gtcagcaccgtggtgtga
DBGET
integrated database retrieval system
