Cololabis saira (Pacific saury): 133451232
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Entry
133451232 CDS
T09849
Symbol
nelfb
Name
(RefSeq) negative elongation factor B isoform X1
KO
K15180
negative elongation factor B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133451232 (nelfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133451232 (nelfb)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
133451232 (nelfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COBRA1
Motif
Other DBs
NCBI-GeneID:
133451232
NCBI-ProteinID:
XP_061586187
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All DBs
Position
9:complement(47888495..47932532)
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AA seq
653 aa
AA seq
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MELPHVKLSAAIIVLGRVFNSRKFNENIIFSSTNSKVDDNIRTIMFAGLSELGISNGEDL
KETLTNCTEPLKAIDQFQMENGILLPTLQSALPFLDLHGTPRLEFHQSVFDELREKLMER
VATIAEGKDEDRYGKLEELLEKSFPLVKMPSIQPVVMQVLKHLPKVPEKKLKMVMADKDL
YKVCAVEVKRQIWQDNQALFGDEVSPLLKQYIVEKEAALFSSDLSILHNFFSPSPKMRRQ
GEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLDISEICTVD
PCHKFTWCLDACIREKFVDGKRARELQGFLDGVKKGQEQVLGDLSMILCDPFACNTIVLS
IMRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVFKEPRLDLEVVTRFLPAM
MSVVVDDHTFMVDQKLPSEEKSSVSYPAGLPDAFSRFLQDNRVACEMGLYYILHIAKLRN
KNALQRLLPALVETYNDMAFSDIFLHLLTGHLTLLSDEFGSEDFCTVVFDGFLLISFSSK
ENVHRHALRMLLHLQHKVLPSYMEMLMKTLEPPKQRAAQGAVRSADGQAGGPEEKPPDPG
GDPSPEPGDPPPCPCLHHHPLHSHYTCLRPLNLGTLHPVPVSTTTPSTPTTPV
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcctcacgtgaagttgtcagcggcaatcattgttttgggacgtgtttttaat
agtagaaaattcaacgagaacattattttttcatccacaaattccaaagttgatgataac
atcagaaccatcatgtttgcggggctgtctgagctcggaatctccaacggcgaggatctt
aaagaaactctcacgaactgcacggagcccctgaaagcgatcgatcagtttcagatggag
aatggtatcctgctgccaacgctccagtcggctctgcccttcctggacctccatgggacg
cctcggctggagtttcaccagtccgtctttgatgagctccgagagaaactgatggagcgg
gttgctaccattgcagaaggaaaggatgaagacagatatggaaaacttgaagagctgctg
gagaagagctttccacttgtgaaaatgccatccattcagccagtggtaatgcaagtgcta
aagcatctacccaaggtgccagagaagaaactaaagatggtgatggctgacaaagacctg
tacaaggtgtgtgctgttgaggtgaaaagacagatctggcaagataaccaagctctgttt
ggggatgaagtctccccccttctaaagcagtacattgtggagaaggaagcagctctgttc
agtagtgacctctccatcctgcacaatttcttcagtccttctccgaaaatgcgacgccaa
ggcgaggtggttttaaagctgacccagatgataggaaaaaatgtgaagctctatgacatg
gttctgcagttcttgcgaacgctcttcctccgaacacgaaatgtccactattgcacactg
agagcagagctgctgatgtctctgcacgatctggacatcagtgagatctgcacggtggat
ccctgccataagttcacttggtgtttagacgcctgcatccgtgagaagtttgtggatggc
aagagagcgagggaactgcaaggtttcctggacggtgtgaaaaaaggacaggaacaagtc
cttggggacctgtccatgatcctctgtgacccatttgcctgtaacaccatagtcctgagt
ataatgaggaacttgcaggagctgctgagtcaagacgcactacctcgagacagtccagac
ctgatgcttctgctgaggatgctgtccctgggtcaaggagcatgggatatgattgacagc
caggtcttcaaagagcctcgtttggacttggaagtggtgacccggttccttcctgccatg
atgtcggtggttgtggacgatcacaccttcatggtggaccagaagctgcccagtgaagag
aagagctcggtgtcgtacccagcaggtctccccgacgccttcagcagattcctgcaggac
aacagagtggcctgtgagatgggtctctattacatccttcacatcgctaaactccggaac
aagaacgccttacagaggttactgcctgctctagtggagacgtacaatgacatggccttt
agtgacattttcctgcacctgctgaccggacacctcactctgctgtcggacgagtttgga
tcagaagacttctgtaccgtcgtcttcgatggattcctgcttatttcattctccagcaaa
gaaaatgtccacagacacgccctccgcatgttgctgcatctccagcacaaagtgctgccg
tcctacatggagatgctgatgaaaactctggaacctcccaagcagcgagccgctcaagga
gctgtacgctcagctgacggccaagctggaggcccagaagaaaagcccccggaccccgga
ggagaccccagccctgaacctggggaccctccaccctgtccctgtctccaccaccacccc
ctccactcccactacacctgtctgagacccctgaacctggggaccctccaccctgtccct
gtctccaccaccaccccctccactcccactacacctgtctga
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