Cololabis saira (Pacific saury): 133451275
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Entry
133451275 CDS
T09849
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133451275
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
133451275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
133451275
NCBI-ProteinID:
XP_061586227
LinkDB
All DBs
Position
9:complement(32416176..32431405)
Genome browser
AA seq
2180 aa
AA seq
DB search
MFRRSRFSARPNVSTLGRTASAASQETPAANQEAGETIKEAGENVSAAAAATNKTDVTPI
SSGDGNEQNVEGASSSAAVQRRKRFSVKPKVAPGRLPALSRTPKSPIKAASVARVDSHGS
DFNQPSTSSQSGAAAAPQGLQSPRRRRQSEDGNQLKMPPKTSETSGPTAEESPDQSRLSP
DSSKMSENSSGVQRKESPFKVPPSLPDKEATEISEKAKTLVSSKHVSSLKSSALSLTRLL
NSPSDLQRLAKAQKLRELLKQEQSKEKRQKRAKSRPKEFTLDPAKMTMRDLIYYLPTSNP
MLSSLDEDQENETEVPPSPGREESPEQAKEPKILPNKAVSGEEEEAAVVDEEEEEDDAIM
VPQVRVAEDGTLIIDEESLTVEVKRAKGPNPAEGRDPIFERGSTTTYSSFRKGTYTKPWS
AEETDMFFLAISMVGTDFSMICQLFPHRARSEIKNKFKREERENSWRIDKAFKDRRKLDI
DCFSKLLEKVLEVQKDRKKLKSLVEKNTPKKSKTKAKGKKSANKLSDIEEEEDENKVLEL
EEGGEKENDDQSVEGGVPAPEPKKKCKRKTKASVLNEEPTNKKNKTDEAGVPEDSEAALP
EDQTNDTSDKTENVPTIKPAKLCRSRAPKPLVPLGLKRGKKPPPTLKDKETPSDKDGENA
RGEVSNEQENNDESQASQSNKKMSDDTSEEEEEDTPVKPQKPTRYGRVPKPTQPLNYPPE
EEPQPSDSETSLQKSKPKSSLKRGKASKQQPAEKSKKAKLITLRSSRSEFSDEDNDNQEE
TGEQASCSSSSSNAPLFVPDSLHAANAEITEVDENMVELEILASMPDVLGISQDALCPDS
SCHQAQHETGTAEPCEHQLDLLVDVIDFLSSEHAEVSHDESYTEAAQALLTIGNMPHVTQ
SAQSELSLQDYTTGATWDGGNGPSQTEEETLPHSVSADFSQRLTETSANASAEELQGSGA
DGWDTSHTRTSEQTLVELQTVCMDPTPPVQPDPNVPPTKAGRSSKVKPKPHLGRTSRAVQ
PVSHAEISPGESHLAAPPSDTPSAAEETAPEISQSAALLEDPLLLTEVKVTEEPSDNKKL
EVESGAPSSDQSSCSFSEPQSEPSREQVTTDATSTEESHVGSAETGFNKPATSDPATTGA
EQESCRDAAPVQETGDKPPAEDLTPSQKGGGEVAGPSQSRRSRLPKVKPKPNLPQTSRAA
KYKPQATEDAVDQDSAPTPTAKVDPEPTCSPSPTSTPAEEPPANEEIKMHAGLAVLDAPS
SDQSATGNQNITEPQCEPSREQVTTDAKSTEESHVGSAETAFNKPVTSDPTTTGAEQESC
REAAPVQETGDKPPAEDLTPSQKGGGEVAGPSQSRRSRLPKVKPKPNLPQTSRAAKSKPQ
ATEAAVDQDSAPTPTQPTCSPSPTSTPAEEPPAKEEIKMHAGLAVLDAPSSDQSVTGNQN
ISEPQSEPSKEQVTTDATSTEESHVGSAETGFNKPATSDPATTGAEQESCRDAAPVQETG
DKPPAEDLTPSQKGGGEVAGPSQSRRSRLPKVKPNLRLTSRAAKSKPQATEDAVDQDSAP
TPTAKVDPQPTCSPSPTSTPAEKPPANEEIKMHAGLFDPAVLDAPSSDQSVTGNQNISEP
QSEPSKEQVTRETGSISGFTEENLASHGGAPESGCRNAALTDVAVTEPPDGKGSTVYSGG
TADPAETTAPEEESMVGQQEREAATASLLQPSLAQTLRAARPKPQTAEKSIEKDSNPEFI
INTIADAELTCTPSVINPASVNSEEKKTYAGPVDQTETVANTSGQSATESLTVSEVQTEP
SGEPAATEPSTGTESQSGQGSNSTSVQDESGHLGAFDTSAGESSVSRGETEDTSQCQRRR
SRLQRPKPNLQQAPKTSGLQPQAKNEPAEKDLSASPTPQFRKTISEVEPQDASLPEKHSG
STDVGPVSKEDLGGLRSDPVASEDQSISGVQLEPSTEQVTDENLAHRAGAAESSLNNVTS
ADTAATEPQGGLSPNVNSASVQKQSEKPSTSDTSVGKSSVSTEEAQVASASQTRRSRFPK
PKPNLPQTSRAARLRPQTPKGTVSPSPKAELTKTTTAEVQPQLPGTSLPRVAGKNTPGGL
LQAVDESQSSSPRPEPSDDDTLAEAEARSTQAKSAVSETPVESASAQKCTEEPSSAEELL
RTNAANVTSLEAAEQHEAPR
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccggtcgaggttcagtgcgcgtcccaacgtcagcactttagggagaacagcc
tcggcagcatctcaggaaacccctgcagcgaaccaggaggctggtgagaccataaaagaa
gctggcgagaacgtcagtgctgctgctgcagcgacaaacaaaaccgatgtgaccccgata
tcttcaggagatggcaatgagcaaaatgtggaaggtgccagctcctcagcagcagtgcag
agaaggaaacgtttttctgtcaagcccaaagtggctcctggtcggcttcctgccctttcc
cggaccccgaaatcccccatcaaggcagcgtccgtggcacgcgttgactcccatggctca
gacttcaaccagccatcgacatccagccagagtggcgccgcagcagcccctcaaggactt
cagtccccgaggcggcgaaggcagtctgaagacggcaaccagctgaagatgccgcccaaa
acctctgagacttcaggtcccacagctgaagagtcaccggatcaaagccgcctgtcacca
gacagcagcaaaatgtctgaaaactcttcaggcgttcagcgtaaagaatctcctttcaaa
gtaccaccctctctacctgacaaagaggctacagaaatatcagagaaagccaagactctc
gtgtcgtccaaacacgtgtcttcgctgaaatcatctgcgctctcgttgacgaggctgctg
aacagcccgtcggacctgcagaggctggccaaggcccagaaactcagagagttgctcaaa
caggagcaatcaaaagaaaagagacagaagagagccaagtctcgtccgaaggaatttact
ttagatccggcgaaaatgaccatgagggaccttatctattaccttccaacatctaacccc
atgttatccagtctagacgaagatcaagagaacgagactgaggtcccaccatcaccagga
agagaagagtctcctgaacaagccaaggaacctaaaatcctccccaacaaggcagtttca
ggggaagaggaagaggcggcggtggtggatgaagaggaggaggaggatgatgcaatcatg
gtccctcaggtcagagtagcagaagatggcacgctgatcattgatgaagaaagcttgaca
gttgaagtcaagcgagccaaagggccaaacccggccgaggggcgggaccccatctttgaa
cgcggctccactacaacgtactcaagtttcaggaaggggacctacacaaaaccctggtct
gctgaagagacggacatgttcttcctggccatcagcatggtgggaacggacttctccatg
atctgccaactgtttccacacagagctcgatctgaaataaagaacaaattcaaaagggaa
gagcgagagaactcatggaggattgataaggctttcaaagatagacgcaaactggacata
gattgcttttctaagctgctggagaaagttttggaagtacagaaagacaggaaaaagctg
aagtcgcttgttgagaagaacacccccaagaaaagcaaaaccaaggcgaaaggcaaaaaa
tctgcaaataaactgagtgatattgaagaggaggaagatgaaaataaagttcttgagctg
gaggaaggaggagagaaagagaacgacgaccagtcggtggaaggaggcgtccccgctcct
gagccaaagaagaaatgcaaaagaaagactaaagcgagcgttttgaacgaggaacccacg
aacaagaaaaacaaaacagacgaagccggcgtgcctgaagactcagaggcggcgcttcct
gaggaccaaacaaatgacacgtcggacaagacggaaaatgtcccaactattaagccagcg
aagctctgtcggagcagagcgccgaagcctctggttcctctgggtctaaagcgaggtaaa
aagcctccgcccaccttgaaggacaaggagacgccgtcggacaaagatggcgagaacgcg
aggggtgaagtctccaacgagcaggagaataacgacgaatcccaggcgagccagtccaat
aagaagatgtcagatgacacttcagaagaagaagaagaagatactccagttaaacctcag
aaaccaacgagatatggcagggtgcctaaacccacccagcccctgaattacccccccgaa
gaggaaccccaaccctccgactctgaaactagtctccaaaagtccaaacccaaatccagc
ctcaagagggggaaagcatcaaagcagcagccggccgaaaagtccaagaaagccaaactg
atcaccctcaggtcgtccaggtcagagttcagcgacgaggacaatgacaaccaggaagag
acgggggagcaggcctcatgcagctccagcagcagcaacgcgcctctgtttgtgcccgac
agcctgcacgccgcaaacgctgagatcacagaggtggatgagaacatggtggagcttgaa
atcttggccagtatgcccgatgtactgggcatttcccaagatgcactgtgccctgattca
tcttgtcatcaggcacaacatgagacaggcactgctgagccatgtgaacatcagctggac
ctgctggttgatgttatagattttctgtcgtcggaacatgcagaagtttctcacgacgag
agctacactgaggccgctcaagcgcttctgaccattggcaacatgcctcacgtgactcag
tcagcgcagagtgaactgtccctgcaagattacacaacaggggcgacatgggacggtggg
aatggacccagccagaccgaagaagagactctccctcattctgtgtctgccgattttagt
caaagactcacagaaacgtcagcgaacgcttccgctgaggagttacaaggcagcggagct
gacggttgggacacgtctcatactagaaccagtgagcaaacattggttgagctgcagacc
gtctgtatggatcctacccctccagtacagccagatccaaacgtcccgcctaccaaggct
ggacgctcttctaaggtgaaacctaagccacaccttggcagaacatcaagggctgtgcaa
ccggtgtcccatgcagagatatcaccgggagagagccacttagctgctccgccatctgat
acgccttcagctgctgaagaaacggccccagagatatcacaatctgcagcattgttagaa
gatccccttctccttactgaagtcaaagtaacggaagaaccatctgacaacaagaaattg
gaagtcgaatcgggtgcaccatcatcagatcagagttcttgcagcttctctgaaccacag
agtgaacccagtagggagcaggtcaccacagatgcaacgtccacagaagaatctcatgtt
ggatcagcagagactggttttaataaaccggcgacttcagatccagcaacaacgggggcc
gagcaagagtcttgcagggatgcagctccggttcaggagactggtgacaaaccgcctgca
gaagatttaactcccagtcagaaaggtggaggtgaagttgcaggtccctctcagtctagg
aggagcaggttgccaaaggtcaaacccaaacccaacttgccacagacatccagagctgca
aaatataaacctcaagccacagaagatgctgtcgaccaagactctgctccaactccgaca
gcaaaggtggatccagaaccaacatgttccccatctcctacttccacacctgcagaggaa
ccccctgcaaatgaggagataaagatgcatgctggactggcagtattagatgcaccatca
tcagatcagagcgccacaggaaaccagaacatcaccgaaccccagtgtgaacccagtagg
gagcaggtcaccacagatgcaaagtccacagaagaatctcatgttggatcagcagagact
gcttttaataaaccagtgacttcagatccaacaacaacgggggccgagcaagagtcttgc
agggaagcagccccggttcaggagactggtgacaaaccgcctgcagaagatttaactccc
agtcagaaaggtggaggtgaagttgcaggtccctctcagtctaggaggagcaggttgcca
aaggtcaaacccaaacccaacttgccacagacatccagagctgcaaagtccaaacctcaa
gccacagaagctgctgtagaccaagactctgctccaactccgacacaaccaacatgttcc
ccatctcctacttccacacctgcagaggaaccccctgcaaaagaggagataaagatgcat
gctggactggcagtattagatgcaccatcatcagatcagagcgtcacaggaaaccagaac
atctctgaaccccagagtgaacccagtaaggagcaggtcaccacagatgcaacgtccaca
gaagaatctcatgttggatcagcagagactggttttaataaaccggcgacttcagatcca
gcaacaacgggggccgagcaagagtcttgcagggatgcagccccggttcaggagactggt
gacaaaccgcctgcagaagatttaactcccagtcagaaaggtggaggtgaagttgcaggt
ccctctcagtctaggaggagcaggttgccaaaggtcaaaccaaacttacgactgacatca
agagctgctaagtccaaacctcaagccacagaagatgctgtagaccaagactctgctcca
actccgacagcaaaggtggatccacaaccaacatgttccccatctcctacttccacacct
gcagagaaaccccctgcaaatgaggagataaagatgcatgctggactctttgacccggca
gtattagatgcaccatcatcagatcagagcgtcacaggaaaccagaacatctccgaacca
cagagtgaacccagtaaggagcaggtcaccagagagactggatcaatctctggttttaca
gaagaaaatctggccagtcacggtggagctccagaaagtggctgtagaaatgcagcgtta
actgatgtagcagtcacagaaccaccagatggaaaaggttcaactgtatattcaggagga
accgctgatcctgctgagacgactgcacctgaagaagagtccatggtcggccagcaagag
agagaggctgcaactgcttccctacttcaacccagcctagcacaaacattaagagctgca
agacctaaacctcaaaccgcagaaaagtcaatagagaaagactcaaatcctgaattcatt
ataaatacaatagcagatgcagaactgacatgcactccctctgttataaatcctgcttca
gtcaacagcgaggagaaaaagacgtatgctggacctgtggatcagacggagacggtggcg
aacacatcaggtcagagtgccacagagagcctgacggtttctgaagtccagactgagccc
agtggagagccggcggccacagagccgtctactggaactgaatctcaaagcggacaaggt
tcaaattcaacatctgtccaggacgaaagcggccacctcggtgcatttgatacatctgca
ggcgagtcatcagtcagtagaggagagactgaagacacatctcaatgtcagcggaggagg
agtcgattgcaaagacccaaaccaaacctgcaacaggctccaaaaacatcagggcttcaa
cctcaagccaagaatgagcccgcggagaaagatttgagcgctagtccgacacctcaattc
agaaaaacaatatcagaggtggaaccacaagatgcttctttacctgaaaaacacagtgga
agcaccgatgttggacctgtcagtaaggaagacttgggtggattaagatcagatccggta
gcttcagaagaccagagcatctcaggagtccagcttgagcccagtacggagcaggtcacg
gatgaaaacctggcacatcgcgctggagcagccgagagtagtttaaataatgtgacgtca
gctgacacggcagccacagaaccacaaggtggactaagcccaaatgtgaattcagcatca
gtccagaaacaaagtgagaagccctcgacatctgacacctccgtgggcaagtcctccgtc
agtacggaagaggcgcaggtcgcatctgcttctcaaacaagaaggagtcgattcccaaaa
cccaaaccaaacctcccgcagacatcaagagcagcaaggctcagacctcaaacccctaaa
gggacagtaagtcccagtccaaaagccgagttgactaaaaccacaacagcagaggtgcaa
ccacagctgccggggaccagtctgccccgggtggcaggtaaaaacacacctggcgggctc
ctgcaggctgtggacgaatcccaaagttccagccctcggcccgaaccctctgatgacgac
acactagcagaggcagaagcgagatcaactcaagctaaatcagcagtttcagaaacacca
gtggaatcggcgtcggctcagaaatgcacagaggaaccatcttctgctgaggaactgctg
agaacaaacgcagcaaacgtgactagtttagaggctgcagaacaacatgaagctcccagg
tag
DBGET
integrated database retrieval system
