Cololabis saira (Pacific saury): 133451309
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Entry
133451309 CDS
T09849
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133451309 (snapc4)
03021 Transcription machinery [BR:
csai03021
]
133451309 (snapc4)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
133451309 (snapc4)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
133451309 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
MYO15
Motif
Other DBs
NCBI-GeneID:
133451309
NCBI-ProteinID:
XP_061586259
LinkDB
All DBs
Position
9:42270081..42297608
Genome browser
AA seq
1485 aa
AA seq
DB search
MSLSLSAERDRIQREVEELEQSLSVTQTELDLLSSDSDDDDDSDCEDVEIEVGQSAAGLL
AQKEKIQKEIQNLEGILGPDRPISVSDDDNDSRSSDESDLGLSSSVESCLQLNLVYQQVV
EDTLDQLETLLGQNQKQQKEILTQMSGPVKESSRDQPPRSSYQLPAKMFLGRFLKPYFKD
KLTGLGPPANEEARQRAQRMAGCLDDKKLKPKRWESWQKTLLIHSVARDSLKRLVQPKLS
RVNYLSQKMSSAGPAERQQLGESMEALEVEMELLREKKEEELIGDRYEEHDWQKISNIDF
EGTKDAGDIRLFWQNFLHPSVNKSSWSKEEVQRLKEVSGRHQDADWDQIAEELGTGRTGF
MCLQMFQRFVSSSLKRGSWTPDEDALLKELVHKMRIGNFIPYTQMTYFMEGREPSQLIYR
WNQVLDPALKKGPWSKEEDQLLRQAVAQHGEKWWKVRVEVPGRTDGGCRDRYLDCLKGDV
IKGPFDKQECKLLLMLVKKHGVGRWAKIAAEIPHRVDAQCYRAWKKLSKTVDVSKVCVGG
GGGEGGNGGKKAAPSTKAKKRIRKGSAQVKEEKLTEDEDEDEDEDENEDEKEVVEYMDSG
DEKKGKQKEVKDEEEEEEEDLVLLPMQHWAPAEKPRPDPNLHFHPATLPPSSGPGDGNLV
RSTVLAKAGRSVVLGPRPTVLRWEERHSSRAMMMLSCDQLRAHWSRLGLKLSRYRGPEET
PSAGRHIASKRATEFKLRAAVMPWVGNLLIASRARRTVADVQRERGERAAVSSTAVFLLL
LQAMNVDSYGCKQTIKQRQSRAAPAPAAPASRNRKPATVASLLQQARMKRQQEEEQQRLM
LQRLEELQEETPPPPPPPPLGPVFLQVPPQGAPGLPHPPIHSVYSMNTALPAPVTVPLIV
ATFPRGVTLACSPQVPPQAPPPSHHPPLSVGSSRLSGGVGGSQDAHGAAALEESQMSTSL
SSNWAVSSAESLSVALPPCTVISKPPTSPFRDHSYPCLSPHSGTGSPKQPGPSPKTAPKR
QSRGRKRQRETEPQDPAGPGVTEQDPAGPGVAEQGVHGSDAGPGVAEPGKRLRRPSLKAK
ALKEAQQVQRRGTQSQAAARRGSSSSSPRRKRPHRSPSQDLGVAQALPLNPGPALPLDMN
QAVWVVTPAGLVALAQPVPPGLAFIPGTTHTPAQETSPDLPLAPPPAPAAPLKPVTAPSP
RPPPKVVRVSPSKAPALCREGLQFDPSLMFLEPPEQVQGWLSGTGGVEVPGGRVPLPYMP
PFMGSLSTLSALLTSMKATRQTSLQLLDPPRGRTRPEPPTRTAEAQHPAPLPDSTSDRPG
DPSDPSDPPTARQQQQQQQQQQQQQQQEEEEQVRAVRQLVAERFSTNPAYQLLKTRFLSC
FTVPALLASLHPIRKDRLPRQTEEDDDYEEDEDDEEDEEMKIFREMGRSKRAERSLLLLD
GSGAPADHFQGIRDQEHLPAPHGSDHDRRGQAGPAGTATHVEQTE
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtccctgtcagcagagagagaccggatccagagagaggtggaggagctggaa
cagagtctctctgtaactcagactgaactagacctgctgagcagcgactcagatgatgat
gatgactcggactgtgaagacgtggagatcgaggtgggacagtctgcagcaggtctgctg
gctcagaaggagaagatccagaaggagatccagaacctggagggcatcctgggacctgac
agacccatctctgtatcagatgatgacaatgacagcagatccagtgatgagagtgacctg
ggactgtcgtcttcagtggagtcgtgtctccagctgaacctggtctaccagcaagtggtt
gaagatacgttagatcagctagagacgctgctgggacagaaccagaaacaacagaaggag
atcctgactcagatgtctggaccagtcaaagagtcctccagggatcagcccccccgctca
tcctaccagctaccagctaagatgttcctgggacgcttcctcaaaccgtacttcaaagac
aagctgacgggactgggtcctccagccaatgaggaagccaggcagagagctcagaggatg
gcggggtgtctggatgacaagaagctgaagccaaaacgatgggagagctggcagaagact
ctgctcatccactcggtggccagagacagtctgaagagactggtccagcccaaactctcc
agggtgaactacctgagccagaagatgtcgtcggcggggccagcagagcggcagcagctg
ggggagagcatggaggctctggaggtggagatggagctgctcagggagaagaaggaggag
gagctgattggtgatcgatatgaagaacacgactggcagaaaatatcaaatatagacttt
gaagggacgaaggacgcgggagacatccgtctgttctggcagaacttcctccacccgtcg
gtgaacaagtcgtcctggagtaaagaggaggtgcagcggctgaaggaggtgagcgggagg
caccaggacgccgactgggaccagatcgcagaggaactggggacggggaggacaggcttc
atgtgtctgcagatgttccagaggttcgtctccagctctctcaaacggggcagctggact
ccagatgaagacgctctgctcaaggagctggtgcacaagatgaggatcggaaacttcatc
ccctacacgcaaatgacttacttcatggagggtcgggaaccgagtcagctcatctacaga
tggaaccaggttttggacccggccctgaagaaaggtccgtggagcaaagaggaagaccag
ctgctgcgccaggccgtggcccagcacggagagaagtggtggaaggtccgagtggaggtt
cctggacgcaccgacggtggctgcagggacaggtatctggactgtctgaagggggacgtt
atcaaagggccatttgataagcaggagtgcaagctgctgctgatgctggtgaagaaacat
ggagttggtcgctgggcaaagatcgctgcagagatcccccaccgtgtcgatgctcagtgt
tacagggcgtggaagaaactgagtaaaactgtggatgtaagtaaagtgtgtgtgggagga
ggaggaggagaagggggaaatggggggaagaaggcggcaccaagcaccaaagccaagaag
agaatcaggaaagggtcggctcaagtaaaagaggagaagctcactgaggatgaggacgag
gacgaggacgaggatgagaacgaggatgagaaagaggtggtggagtacatggacagcggt
gacgaaaagaagggaaagcaaaaagaggtgaaggatgaagaggaggaggaggaggaggat
ttggttctcctgcccatgcagcactgggctccagcggagaaacctcggcccgatcccaac
ctgcactttcacccagcgacgctgccgccatcctccggccccggcgacgggaacctggtg
cgctccaccgtcctggccaaggccggccgctccgtggtcctgggcccccggcccacggtg
ctgcgctgggaggagcgccacagcagccgcgccatgatgatgctgtcctgcgaccagctc
cgggcccactggagccgcctggggctgaagctcagcaggtaccgcgggccggaggagacg
ccctccgccggcaggcacatcgcctccaagagagccacggagttcaagctgcgggccgcc
gtcatgccctgggtgggcaacctgctgatcgcgtccagggccaggcggacggtggccgac
gtccagagggagaggggagagcgggccgccgtctcctccaccgccgtcttcctgctgctc
ctgcaggccatgaacgtggacagctacggctgcaagcagaccatcaagcagcggcagagc
agggcggccccggctccggccgctccggccagcaggaacaggaagccggcgaccgtggcc
agcctgctgcagcaggcccggatgaagaggcagcaggaggaggagcagcagaggctgatg
ctgcagcggctggaggagctgcaggaggagacgcctcctcctcctcctcctcccccacta
gggcctgttttcctgcaggttcctcctcagggggcacctggccttcctcatcctcccatc
cattcagtttactccatgaacacggcccttcctgctcccgtcacagttcctctgattgtt
gctacgttccccaggggtgtcactctggcctgtagcccacaggtgccaccgcaagcccca
cccccttcccatcacccccctctgtccgtgggcagcagccgtctgagtggaggtgtggga
gggagccaggacgctcacggggcagcagctctggaggagtctcagatgtccacatcttta
agctccaattgggccgtctcctcagctgaaagtctgagcgtagctctgcccccctgcaca
gtcatcagtaaacctcccacctcgccgtttagagaccacagctacccctgtttgagtcct
cactctggaacaggctcccccaaacagcccgggccgtcccctaagacggctcccaaacgc
cagtcaagagggaggaaaagacaaagagagacggagccgcaggacccggctgggccgggt
gtgactgagcaggacccggctgggccgggtgtggctgagcagggcgtgcacgggtcagac
gcgggtccgggtgtggctgagccggggaagaggctccgcaggcccagcctgaaggccaaa
gctctgaaggaagcccagcaggtccagcggagaggcacacagtcacaggctgcagcgagg
aggggctcctcctcctcctctcctcggaggaaacgcccccacaggtctccctcacaagac
ctaggtgttgctcaggctctgcccctgaaccccggccccgccctgcctctagacatgaac
caggctgtgtgggtcgtgacccccgccggactggtggcactggcccagccggtgccgcca
ggcctggcattcataccaggcaccactcacacgcctgcacaagaaaccagtccagatctt
cctctggccccgccccctgcaccagcagcccccctgaaaccagtcactgctccctctccc
cgaccgccccccaaagtggtccgagtgagcccgtccaaggccccggccctctgtcgggag
gggcttcagtttgacccctccctgatgttcctggagcccccggagcaggtgcagggttgg
ctgagcgggaccggaggggtggaggttccgggagggcgggtgccgctgccctacatgccg
cccttcatgggcagtctgagcacgctcagtgcgctgctgacgtccatgaaggccaccagg
cagacttcgctgcagctgctggatccgccacggggccggaccaggcccgagccaccgacc
aggaccgctgaggctcagcatccagctcccctgccagactccacctctgaccggccaggg
gacccgtctgacccgtctgacccgcccaccgcccggcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcaggaggaggaggagcaggtgagggcggtgcgtcagctcgtt
gcagagcgcttctctacgaaccctgcctaccaactgctgaagacccgcttcctgtcgtgc
ttcactgtccccgccctcctggccagcttacatccaatcaggaaggacaggcttccccgt
cagaccgaggaggacgatgactacgaagaggacgaggacgacgaggaagacgaggagatg
aaaatattcagagagatgggaagaagtaaaagagccgagagatctttgctgctgttagat
ggctccggagctccggccgatcactttcaggggatcagggatcaggaacatctgccagcc
ccccacggatcagaccatgacagaagagggcaggctggaccagcgggaaccgcaacacac
gtagagcaaacagaataa
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integrated database retrieval system
