Cololabis saira (Pacific saury): 133451321
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Entry
133451321 CDS
T09849
Symbol
si:dkey-3h3.3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133451321 (si:dkey-3h3.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133451321 (si:dkey-3h3.3)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133451321 (si:dkey-3h3.3)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133451321 (si:dkey-3h3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_4
zf-C3HC4_3
zf-rbx1
zf-RING_10
zf-RING_11
DUF1272
zf-C3HC4_4
TrmO_C
KHA
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-GeneID:
133451321
NCBI-ProteinID:
XP_061586272
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All DBs
Position
9:complement(44337674..44368498)
Genome browser
AA seq
451 aa
AA seq
DB search
MPSGVPGQRLVIKSDFTVGRGKPQTKWCEFLTDITLIIHAREHGGPERIARLCTSRHERR
GSVFIVPGTFEELDKLVEKVLAADPRPPSPVLPPSQRAPAPVQPLTVSRLVLDYIQKKCA
DKLQRIQGDCVLEELPPDAGAVQAGAPGAPGAPGTVRVTFRPPRGSSSPPAFVRQRFITF
YQRTASDLQVLRLRTGGLPDLSSRFPLLLVQYPPGGGATVTGPFAHVAQLKQLLSQKSSS
TKSPRPAVVPSRDLPGPAAQPEQQPDNESCPICMEPIQARDKKTLRCTHSFCRDCLRTAF
DYKPVCPICGEVYGTLRGTQPHGGTMDVRLASSPLPGYEKWKTIVIHYHIPSGIQKEEHP
SPGQPFEGVSRTAYLPDNAEGNAVLRLLRRAFDQRLVFTIGRSTTSGRNNMVTWNDIHHK
TSTHGGPSHYGYPDPDYLRRLRDELKVKGIE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaggtgtccccgggcagaggctcgtcattaagagtgacttcactgtgggccga
gggaagccccagactaagtggtgtgagttcctcacagacatcactctgatcatccatgca
cgtgaacacggaggccctgagcggatagcgaggctctgcacctcccgccatgagaggaga
ggctccgtcttcatcgtgccggggacgtttgaggagctggacaagctggtggagaaggtt
ttggcagcagaccctcgccccccgtcccccgtgctcccgccgagtcagcgcgccccggcc
cccgtccagcccctgaccgtgtccaggctggttctggactacatccagaagaaatgtgca
gataaactccagcggatccagggcgactgtgttctggaggagctgccgccagacgccggc
gcggtgcaggccggagcccccggagcccccggggcccccggcacggtccgggtgaccttc
agacccccgcggggatcttcatctccccctgcgtttgtgagacagagattcatcaccttc
taccagagaactgcgtcggacctgcaggtcctccgtctgaggaccggggggctcccggac
ctgagcagcaggttccccctcctcctcgttcagtatcccccaggaggtggtgccaccgtc
acagggccgttcgcacacgtcgctcaactcaagcagcttctttcccagaagtccagttca
accaaaagccctcggcccgcagtggtaccgagcagagacctgccgggtcctgcagcacag
ccagagcagcagcctgataacgagtcgtgtcccatctgtatggagccaatacaagcccga
gacaagaagacgctgcggtgcacacattccttctgcagggactgcctgagaaccgccttc
gactacaagcccgtgtgtcccatctgtggagaggtgtacggcacgctgagggggacgcag
ccccacgggggcaccatggacgtccgcctagcgtcttcacctctacccggatacgagaag
tggaaaaccatagtcatccattaccacatccccagcggcattcagaaggaggaacatccc
agccccggccagccgttcgagggcgtgtcccggacagcctacctgccagacaacgccgag
ggcaacgccgtcctgaggctgctgaggcgagcgtttgaccagaggctcgtcttcaccatc
ggccgctccaccaccagcggcaggaacaacatggtcacctggaacgatattcaccacaag
acctccacacacggaggaccctcacactacggatacccagacccggattacctccgccgg
ctcagggacgagctcaaggtcaaagggattgaatga
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