Cololabis saira (Pacific saury): 133451339
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Entry
133451339 CDS
T09849
Name
(RefSeq) LOW QUALITY PROTEIN: protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133451339
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
133451339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
NBCH_WD40
HIRA_B
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_like
Motif
Other DBs
NCBI-GeneID:
133451339
NCBI-ProteinID:
XP_061586292
LinkDB
All DBs
Position
9:complement(717891..760580)
Genome browser
AA seq
1026 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNDNVP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAALIGPSTVFGSSNKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVVWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTVDWRLEADVTKPFTECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSTKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLSEEEKNSIHQNIYGKSLAITNTEVQLSTTVIENPEMLKYQQDRGSLGGLGGRAQ
NQPSGGALGPGGPGGAEAPKVNSVMNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQ
LDTGDFSPALFNSAPILPSGSSLSNQLNPALNSDSRDPVPVLVPVQVPGPGSGLRTTQDP
SKDDKDEVKAGLLLSSASKMEPMKALDSRFTERSKATPGVAIASTAGLGPADGRPRDAVS
ACRDANKSKDDTSSDSEDKMAAINKNLAFGKRKAELLLDGAEVVEKRKKGRPRKDKMATA
APQPFPPGAPGPDGGASRTAAPPLAAAAATLKLPTPSTQKAFSLQVSSDPSVFLEVENDV
SVVAGSKLSQLRCSRDGRDWNTLLPCSVVTAAGSSEVLAVACEDRMLSVFSSCGRRLLPS
IQLATPISALHCSAHFVMALTSGAALSVWDVQKQTALVRNESLMTILAGGDVSVSQSLLT
QHGVPVIGLSNGKSFCFSSSLETWTLVADRADSLVQGADFRSCLPSHDAPVISGPLAVMQ
GRHLNAGRLASRLSSVPHQLQQSMTLAFLENQLAASLALQSPAEYRYWLLVYARFLVHEG
SEQRLRFLCKELLGPVHKSAASSWEPTTLGLLKRDLLQELLPVIGENLQFQRLFTEYQDQ
LELLRK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagcccagctgggtgagccataacggcaaacccatattttcagtcgac
atccacccggatggaaccaagtttgcaacgggaggtcaaggggaggattcggggaaggtg
atgatctggaacatggctccggttctccgggaggaggacgagaagaacgacaacgtcccc
aagatgctctgccagatggacaatcacctagcctgcgtgaactgcgtccgctggtccaac
aacggtctgtatttggcgtcaggaggagacgacaagctggtgatggtctggaaacgagca
gcactaatcggtcccagcaccgtgttcggctccagcaacaagctagctaacgtggagcag
tggaggtgcgtgaccatcctgaggaaccacacgggagatgtcatggacgtagcctggtcc
ccccacgacgtctggctagcttcctgcagcgtggacaacaccatcgtcgtctggaacgca
cgcaagttcccagagatggtgacgtgtctgcgcggccacaccgggctggtgaagggcctc
acctgggacccggtggggaaatacattgcgtctcaggccgacgaccacagcctgaaggtt
tggaggacggtggactggaggctggaggccgacgtgaccaagcccttcacagagtgcggc
gggacgacccacgtcctccgtctgtcctggtctcctgacggccagtatctcgtctcggct
cacgccatgaacaactctggccccacggctcagatcgtggagcgggacggctggaaaacc
aacatggacttcgtgggacatcgcaaggccgtcaccgtggtgaagttcaaccccaagatc
ttcaagaagaagcagaagaacggcagctccaccaaacccagctgtccgtactgctgctgc
gccgtgggcagcaaggaccggtccctctccgtctggctcacctccctgaagcgccccctg
gtggtgatccacgacctctttgacaaatccatcatggacatcagctggactctgacgggt
ctggggatgctggtctgctccatggacggaaccgttgcctacctggacttctccctggac
gagctgggagacccgctgagtgaggaggagaagaacagcatccaccagaacatctacggg
aagagtctggccatcaccaacacggaggtgcagctgtccaccaccgtcatcgagaacccc
gagatgctcaagtaccagcaggaccgggggagcctggggggcctggggggccgggcccag
aaccagccctccgggggggccctggggcccggggggcccgggggggccgaggcccccaag
gtcaacagcgtcatgaacggggaatctctggaggacatacggaagaacctcctgaagaag
caggtggagaccagaacggccgacggcaggagaagaatcacgccgctgtgcatcgctcag
ctggacacgggggacttctccccggcgttgttcaacagcgcccccatcctgccgtccggc
tcgtctctgtccaaccagctgaacccggcgctgaactcggactccagagacccggtcccg
gtgctggtcccggtccaggtcccgggtccgggttcaggactccggaccacccaggacccc
agcaaggacgacaaggatgaggtcaaggccggcctgctgctaagctccgcctccaagatg
gagcccatgaaggcgctggactccaggttcaccgagaggtcaaaggccacgccgggcgtc
gctatcgcctccacggcgggactgggacctgcagacggccggccgcgggacgccgtctcc
gcctgcagagacgctaacaagtccaaggacgacacgagcagcgacagcgaggacaagatg
gccgccatcaacaagaacctggcgttcggcaagaggaaggcggagcttctgctggacggg
gcggaggtggtggagaagaggaagaagggccggccccgcaaggacaagatggccaccgcc
gccccccagcccttccccccgggggccccggggcccgacgggggggccagcaggacggcg
gcaccgccgctagccgccgccgcggctacgctcaagctgccgacgcccagcacccagaag
gccttcagcctgcaggtgagctcggatccctccgtgttcctggaggttgagaacgacgtg
tcggtggttgccggttcaaagctcagccagttgagatgcagcagagacggacgagactgg
aacacactgctgccttgctcggtggtgacggcagccgggagcagtgaggtcctagccgtg
gcctgcgaggacaggatgttgtccgtcttctcctcctgcggacggaggctcctcccctcc
atccagctggccacgcccatctccgccctgcactgctccgcccacttcgtcatggctctg
acgtcgggagcggcgctgtccgtctgggacgttcaaaaacagacggctctggtgaggaac
gaatcactgatgaccatcctggccggtggtgacgtcagcgtgtcccagtctctgctgact
cagcacggcgtccccgtcatcggtttgtccaacggaaaatccttctgcttcagctcgtct
ctggagacatggactctggtggccgacagggccgactcgctggtccagggcgccgacttc
aggagctgcctgccttcccatgatgcacctgtgatctcgggcccgctggccgtcatgcag
ggccgccatctcaacgcgggccggctagcctcccgtctgtcgtccgtcccccaccagctg
caacagagcatgacgttagcattcctggagaaccagctagcagctagcctagcgctgcag
tcgcccgccgagtaccggtactggctgctggtgtacgcccgcttcctggtgcacgaaggg
tcggaacagcgtctgcgttttctctgtaaggagcttcttggtcccgtccacaaatcagca
gcttcatcctgggagccaaccacgctgggtctgctgaagcgggacctgctgcaggagctg
ctgccggtgatcggggagaacctgcagttccagagactcttcaccgagtaccaggaccag
ctggagctgctgaggaaatga
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