Cololabis saira (Pacific saury): 133451389
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Entry
133451389 CDS
T09849
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133451389 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133451389 (msi1b)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133451389 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133451389
NCBI-ProteinID:
XP_061586371
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All DBs
Position
9:8711651..8744437
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AA seq
359 aa
AA seq
DB search
METEGSQTCLVSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKR
SRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVN
TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLDGYTDFLSTGYPGFQTATYTSR
SYAGITPGYTYQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAAVVRGATPSR
SAGFLGTSSPGPMADLYGTASQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagacctgcctagtgtccaccacggactccccccacgacccc
tgtaaaatgttcataggtggactcagctggcaaactacacaagagggtctgaaggagtac
ttctgcaagtacggcgaagtgaaagagtgtatggtgatgcgagatccggttaccaagcgc
tcgagagggtttggattcgtcacctttgttgatcaggccggcgtggataaagttttggct
caaaccaggcacgagttggactccaaaacaatcgatccaaaggtcgccttcccccggaga
gctcagcccaagctggtgactcgaaccaagaagatctttgtgggtggcctgtcagtaaac
acaaccatcgaggacgtcaagcaatactttgaccagtttggaaaggtcgatgatgccatg
ctcatgtttgacaagaccacgaacagacacagaggttttggatttgtgacatttgagaac
gaggacgtggtggagaaagtctgcgagattcacttccatgagatcaacaacaaaatggtg
gagtgcaagaaggctcagcccaaggaggtgatgtcccccactggctcagccagggggcgc
tctcgggtcatgccctatgggatggacgccttcatgctgggcatcgggatgctggatggt
tacactgatttcctctccacaggttatccaggatttcagactgccacctacaccagtcgg
agctacgcaggcatcactcccggatacacctaccagttccctgagttccacttagagagg
actccccttctgacttcaccccacccccctgagctcacagccattcctctcacagcatat
ggaccaatggcagcagcggcggccgcggcagcagtagttagaggcgctaccccttctcgc
tcagctggatttttaggtactagcagccccgggccgatggcagacctttacgggacggcc
agtcaggagtcggcggtcagcagttacctcagcgctgcgagtcccgctcccagcaccgga
ttcagccatagtttggggggccctttgattgccacggccttcactaacggctatcactga
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