Cololabis saira (Pacific saury): 133451415
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Entry
133451415 CDS
T09849
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133451415
03041 Spliceosome [BR:
csai03041
]
133451415
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133451415
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133451415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133451415
NCBI-ProteinID:
XP_061586427
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All DBs
Position
9:complement(10910939..10925926)
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AA seq
388 aa
AA seq
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MEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGR
ISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKA
TYENNSKHLSFDEVMSQSSPSNSTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGY
SFIRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMNSMQQMSMPQQQQNKISFAA
AQPYGQWGQWYGNGPQISQYVPNGWQVPTYGVYNQPWNQQGFNHLPASAGWTGMGAISNG
GVMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatcaacccagaaccttgtacgtagggaatctgtccagggatgtcaccgaa
cctctcattctgcaggtcttcacacagataggaccctgcaagagttgtaaaatgatagtt
gatactgctggaaatgatccatactgctttgtggagttctacgaccacaggcatgctgct
gcctcattggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagtcaactgg
gccacaacgcccaccagccagaaaaaagacacaagtaatcactttcatgtctttgttgga
gatctcagtccagaaataaccacagaagatgtcaaagctgcctttggtccctttggcagg
atatcagatgctcgtgttgtgaaagatatgaccacagggaaatctaaaggctatggcttt
gtgtctttcttcaacaaatgggatgcagaaaatgccattcagcacatggggggtcagtgg
ttaggaggcagacagattcgaaccaactgggccacaagaaagccccctgccccaaaggcc
acctatgaaaataactcgaagcacctgtcttttgatgaagtaatgagtcagtccagcccc
agtaacagcactgtgtattgtggtggagtcagcacaggactcacagagcaactgatgaga
cagaccttttccccgttcggacaaatcatggaggtcagagtttttccagacaaaggctat
tcatttataaggttcaactcccatgagtcagcagcccatgccattgtgtcagtgaatggc
tcttcgatcgagggccatatagtgaaatgctactggggtaaagagaccccagacatgatg
aactcgatgcagcagatgtctatgccccagcagcagcagaacaagatcagtttcgctgca
gcccagccctacggccagtggggtcagtggtacggcaacgggccccagatcagccagtat
gtccccaatgggtggcaggtccccacctacggtgtctacaaccagccatggaaccagcag
ggcttcaatcacttacccgccagtgctgggtggactggcatgggcgccatcagtaacggt
ggggttatggagcccacacagggattgaatgggagtatgctagccaaccagcccggtatg
ggagccgcaggataccccacacactga
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