Cololabis saira (Pacific saury): 133451556
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Entry
133451556 CDS
T09849
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133451556 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133451556 (ppil2)
03110 Chaperones and folding catalysts [BR:
csai03110
]
133451556 (ppil2)
04121 Ubiquitin system [BR:
csai04121
]
133451556 (ppil2)
Enzymes [BR:
csai01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
133451556 (ppil2)
Spliceosome [BR:
csai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133451556 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
133451556 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
133451556 (ppil2)
Chaperones and folding catalysts [BR:
csai03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
133451556 (ppil2)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
U-box type E3
133451556 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Type_III_YscX
Motif
Other DBs
NCBI-GeneID:
133451556
NCBI-ProteinID:
XP_061586682
LinkDB
All DBs
Position
9:19791595..19825374
Genome browser
AA seq
526 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTNFYGGKRSEIPQSNFRRLPFDHCSLSLQPFEYPVCTDEGVV
FDLLSIVPWIKKFGTNPISGEKLEAKSLIKLNIAKNSDGKYHCPVLYNVFTNNSHIVANK
VTGNVFSHEAVEQLNIKTKSFKDLLTDEPFTRQDIITLQDPTQLDKFNVSNFFHVKNNVK
VLDPDEEKAKLDPAYHLNSTNLETRETLAELYKDYKGDQLLASTMKEPAAKKTDKLNAAH
YSTGRVSASFTSTAMTPSTVHEADAIADDTVRYQYVKKKGYVRLHTNKGDLNVELHCDKV
PKAGENFIRLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFRDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCIYLDRKHTVFGRIVGGFEALTAMENVESDPKSD
KPKSEIKLISATVFVDPYEEADAQIAAEREKEQQQQEEEKQQASVTLKKAKEAQAPKTFK
QGVGKYINPASMKRSSAGDDSGPSTSAAAAAKKPKGKTSLGDFSSW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagacagcatcaaaaggataaaatgtacattacctgttcagaatacacaaac
ttctacggagggaagcggtcagaaatcccacaatccaacttccgacggcttccctttgat
cactgcagtttgtcccttcagccattcgaatatccggtctgtactgacgagggagtcgtt
tttgacctgctgagcattgttccatggatcaagaagttcggaacaaatccgatctctggg
gagaaactggaagcaaagtccctcattaaactcaacattgccaagaacagcgatggaaag
tatcactgccccgttctctacaacgtcttcacaaataactctcacattgttgccaacaag
gtcactggaaatgtgttttctcatgaggctgttgagcaacttaacatcaagaccaaaagt
tttaaagatctgctcacggatgaaccgttcaccagacaggatatcataacgctccaggac
ccaacacaactggataaattcaacgtgtctaacttcttccatgtgaagaacaacgtgaaa
gttctggatccagatgaagaaaaggccaagctggacccggcgtaccacctgaacagtacc
aacctggaaaccagagagaccttagctgaactctacaaggactacaaaggggatcagctc
ctggcctccaccatgaaggagcccgcggccaagaagacggacaaactaaacgcggcccac
tactcgaccggcagagtctccgcctccttcacgtccaccgccatgactccttccacagtg
catgaagcagacgccatcgcagacgacaccgtccggtaccagtatgtgaagaagaagggc
tacgtccgtctgcacacgaacaagggggacctgaatgtagagctgcactgtgacaaggtt
cccaaagctggagagaatttcatccgtctgtgtaaaaaaggctactacgatgggaccatc
ttccacaggtccatcaggaacttcatgattcaaggaggggaccccaccggcaccggcaca
ggaggcgagtccttctgggggaaacctttcagggatgagtttcggcccaatctctctcac
acggggcggggagttctcagcatggccaactctggtccaaacaccaacaagtctcagttc
ttcatcaccttcaggtcgtgcatttaccttgacaggaaacacaccgtctttggaagaatc
gttggtggatttgaggcgctcacagcaatggagaacgtggagagtgaccccaaatcggac
aaacccaagtcggagatcaagctcatcagtgcgaccgtgttcgtggacccgtatgaagag
gctgatgctcagattgcagcggagcgtgaaaaggagcagcagcagcaggaggaggagaag
cagcaggccagcgtcaccctgaagaaagctaaagaagcccaggcccccaagacctttaaa
caaggtgtggggaagtacatcaaccccgccagcatgaaacgttcatccgctggagatgac
agcgggccgtccaccagcgcagcggcggcggccaagaagcccaaaggcaagacgagcctc
ggagacttcagctcctggtag
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