KEGG   Cololabis saira (Pacific saury): 133451593
Entry
133451593         CDS       T09849                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133451593 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csai03041]
    133451593 (sf3a1)
Spliceosome [BR:csai03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133451593 (sf3a1)
 Complex B
    133451593 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    133451593 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2 Phage_p2_ORF12
Other DBs
NCBI-GeneID: 133451593
NCBI-ProteinID: XP_061586781
LinkDB
Position
9:22260602..22266148
AA seq 784 aa
MSPGPVQIVQPEPTIKQNDAPVEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFE
ARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQALQQSQQL
PQKVQSQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQK
EQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKKEAENPKEVMDQVRYRVE
WAKYQERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARI
LIQERYEKYGESEEVEMEVESEDDEDERENRGEGHASQPDQDTQVQDMDEGSDDDEMSMK
APLPPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPSITTPDEYLISPITGEKIQASKMQE
HMRIGLLDPRWLEQRDRSIRDRQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKK
IGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDAKEKIGP
SKPSDIHHHHPMPSSSMTLPKPSPPITSMPRPPINMAPPVRTTLLSAVPVIPRPPVVRLA
PGQVLASMPPMIPAPRINVVPMPPSAPHVMAPRPPPMVVPTAFVPAPPVPQPPTSAPAPP
AHPPPPHDDEPVSKKMKTEDNLIPEDEFLRRNKGPVAVKVQVPNMQDKTEWKLSGQVLNF
TVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTNGSVIHLALKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgtcgcctgggcctgttcaaatagttcagccggagccgaccatcaagcagaatgatgca
cctgtagaggaaactccagccaccaaacctattgttggtataatctatccacctcctgag
gtccgaaatattgtcgacaagacagccagctttgttgctaggaatgggcctgagtttgaa
gcaagaatccgtcagaatgagatcaacaatccaaagttcaatttcctcaaccccaatgat
ccctatcatgcttattaccgtcacaaagttaatgaatttaaggagggtaaagcacaggag
ccatctgctgcagtgcccaaagttatgcagcagcaggctttgcagcaatcccagcagctt
cctcagaaggtgcaatcccaggtgattcaagagactgttgtccccaaagagccacctccc
gagtttgagttcatagcagatcctccatcaatctcagcatttgatctagatgttgtcaag
ctcacggcacagtttgttgctcgcaatggccgtcagtttcttacccaactgatgcagaag
gaacagaggaactaccagtttgatttcctgagaccacagcacagcctcttcaactacttc
acaaaactggttgagcagtacacaaagattctgatccctcctaaaggcctactgaccaag
ctcaagaaagaagctgagaacccaaaagaggttatggaccaggtacggtaccgtgttgag
tgggcaaagtaccaggagcgtgagagaaaaaaggaggaagaggaaagggagaaagaacgg
gtagcatatgcccagatcgattggcatgacttcgtggtcgtcgagacagttgatttccaa
cccaatgaacaaggccacttccccccacctactactccagaggagctgggtgctcgcatt
cttatccaggagcgttatgagaagtatggagaaagtgaagaggtggagatggaggttgag
agtgaggatgatgaagatgaacgggagaatcggggtgaaggacacgcttcacaacctgat
caagacacccaagtgcaggacatggatgagggatctgatgatgatgagatgagcatgaaa
gcaccattgccacctgacaaccccatgccacccccactccctccaactccagaccaggtt
attattcgtaaagactacgatcccaaagcctccaaaccgcagccctcaattacaactccg
gatgagtaccttatctctccaattactggtgagaagattcaggccagtaagatgcaggag
cacatgcgcattggcctgctggatccacgctggctagaacaaagagaccgcagcatcaga
gacagacagaccgaggatgaagtgtatgctcctggtttggatatcgagagcagcttgaaa
caacttgctgagaggcgtactgatatctttggtgtggaagagacagccatcggtaagaag
attggtgaagaagaaatccagaagccagaagagaaggttacctgggacggccactcagga
agcatggctcgcacacaacaggcagcacaggccaacataactctgcaagagcagattgaa
gccattcataaggccaaaggactggtgggagaagatgacgctaaggagaagattggccca
agtaaaccaagtgacattcatcaccaccatcccatgccgtcttcttcaatgactttacct
aaacccagtcctcctatcacatcaatgcctcgcccacctattaacatggcccctccagtg
cgcaccaccctcttgtctgctgtacctgtaatcccaagacctccggtggtccgcctggca
ccaggacaggttttggcatcgatgcctcccatgattcctgctccccgtatcaatgtggtt
cccatgccaccatcagcaccccacgtcatggccccacgaccacctccaatggttgttcca
acagcatttgttcctgctcctccagtaccacaaccaccaacatctgcccctgcaccacct
gctcatccacccccaccacatgatgatgaaccagtcagcaagaagatgaagacagaagac
aacctcattccagaggatgagttccttcgcagaaataagggtccggtggcggttaaagtg
caggttcccaacatgcaggataagactgaatggaagctgagtggccaagtgttgaatttc
actgtgccacttacagaccaggtttctgttatcaaggtcaaaattcatgaagctacaggc
atgccagctggaaaacaaaagctgcagtatgagggtattttcatcaaggattccaactcc
ctggcgtattacaacatgaccaatggatcagtcattcatttggccctgaaggagagaggt
ggaagaaagaaataa

DBGET integrated database retrieval system