Cololabis saira (Pacific saury): 133451615
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Entry
133451615 CDS
T09849
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133451615 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
csai03310
]
133451615 (rorb)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133451615 (rorb)
Nuclear receptors [BR:
csai03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
133451615 (rorb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
133451615
NCBI-ProteinID:
XP_061586820
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Position
9:complement(22624425..22644536)
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AA seq
476 aa
AA seq
DB search
MELPIHTQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLQEQRQQQTGEAE
ALARVYSSSLTNGLSTLNHEIGGTYANGHVIELPKNGHGNGGGVPGGYYGMDSTQPSPDQ
SGLDMSGMKHIKQEPVYDLTPVPNLFSYGGYQDSQLGSNNVSMGELDRIAQNIIKSHLET
CQYTTEELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMEL
CQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFA
KSLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDAL
AKLISRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMAMPK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcctatacacacccaaatcgaagttataccatgtaaaatctgtggagacaag
tcatcaggtatccactatggagtcattacatgtgagggatgtaagggtttcttcagacga
agtcagcagaacaatgcctcctactcctgcccccgccagaggaactgcctcatcgacaga
acaaaccgcaaccgctgccaacactgccgcctgcagaaatgtctcgccctgggaatgtcc
agagacgctgtcaagtttggccgcatgtccaagaagcaacgtgatagcctgtacgctgag
gtccagaagcaccaggcacggctgcaggagcagcggcaacagcagaccggcgaggctgaa
gctctggcacgcgtttactcatccagcctaaccaacggactgtccactctcaatcatgaa
atagggggcacgtatgccaacggtcatgtcatagagctacccaaaaatggccatggtaac
ggaggtggtgttccagggggctactatgggatggattccacccagccgtctccagaccag
tcaggtctggacatgtcaggcatgaagcacatcaagcaggagccagtttatgatctaacg
ccagtacccaacctcttcagctatggaggctaccaggacagtcagcttgggtccaataac
gtcagcatgggagagctggatcgtattgctcagaatattatcaagtcgcacttggaaaca
tgtcagtacacgacggaggagctacagcagctagcctggcagacgcattcctacgaagag
gtcaaaatgtaccagagcaagccccgggatgtgctgtggcagcagtgtgccatccaaatc
actcatgcaatccagtacgtggtagagttcgccaagcgcatctcagggttcatggagctg
tgccagaacgaccagatcctcctcctcaagtcaggttgtttggaggtggtgttggtgcgg
atgtgcagagccttcaaccctctaaacaatactgtgctctttgagggaaagtatggaggc
atgcagatgttcaaagctctaggttgcgatgacttagtaagtgcggtgttcgactttgcc
aagagtttgtgttcactgcagctaacagaggaggaaatagccctcttctcagcagctgtc
ctaatttccacagatcgaccctggctgatggagcctcgaaaagttcagaagctccaggag
aagatttattttgctctgcagcacattatgcagaagaaccacatggatgaggatgcactg
gctaagctgatcagccgaatcccgacgttgtcagctctgtgcacgctccataccgaggag
cttcaggcgttccagcaactccacccagaaaccgtcaacgtccttttccctccgctctac
aaagaactctttaatccagacccaaattccgctatggccatgcccaagtga
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