Cololabis saira (Pacific saury): 133452026
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Entry
133452026 CDS
T09849
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133452026 (pif1)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133452026 (pif1)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133452026 (pif1)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
133452026 (pif1)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
133452026 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
Herpes_Helicase
Mg_chelatase
UvrD_C_2
AAA_16
RsgA_GTPase
AAA_7
AAA_5
ABC_tran
PhoH
NACHT
AAA_24
Motif
Other DBs
NCBI-GeneID:
133452026
NCBI-ProteinID:
XP_061587196
LinkDB
All DBs
Position
10:complement(33309223..33320534)
Genome browser
AA seq
631 aa
AA seq
DB search
MLCAEEGAELQCTVAVEQLTSCGQTARRQLIRRAAVLLGRNEFQEIILRLHDGKVTHSYR
MKEFRLFTKFVREGKCTVKLLPENIQLLLSNCPPDRLSLFLKTLSIKHQAWQAGKPLSDR
DKLKAGLPRSFEAISPLQHKDIQKVNELRSKAAPPGLADRTNKPAVGTRTGQQVKRSRSD
ANFSPVKANPNKKPILSLPSRKLNKEQAAVLKAVLGGRSVFFTGSAGTGKSFLLKRIMGS
LPPKSTFATASTGVAACHIGGTTLHNFAGIGSGSAPLEQCIELAQRPGVLQHWTTCRHLI
IDEVSMVEAQFFDKLESVARSVRRSTQPFGGIQLIVCGDFLQLPPVSKGKEKASFCFQAR
SWRKVIQVNMELTEVRRQTDQNFISLLQAVRVGRVTEEITSKLMKSAYHEVERDGIVATR
LCTHKTDVEVTNEERLQQLPGAVRVFDAVDSDPELLKTIDTHSPVGRKIHLKVGAQVMLT
KNLDVARGLVNGARGVVVAFQSEKHGLPRVRFLCGVTEVLKPERWVFKSGGGGHLSRQQL
PLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPHVVRAD
PDVLVFYKKLRKERLLMQASMEDFISNNDDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgcggaggagggcgcggagctgcagtgcacggtggcggtggagcagctgacc
tcctgcggacagacggcccgcagacagctgatccgcagggccgccgtcctcctgggccgg
aacgagttccaggagatcattctccgcctgcacgacgggaaggtgacgcacagctaccgc
atgaaggagttcagactcttcaccaagttcgtcagggagggcaagtgcaccgtgaagctg
ctgcctgagaacatccagctgctgctgtccaactgccccccggacaggctgagcctgttc
ctgaagacgctgagcatcaagcaccaggcctggcaggccgggaaacccctcagcgaccgg
gacaagctgaaggctggcctgccccgcagcttcgaggccatcagccccctgcagcacaag
gacatccagaaggtgaacgagctgcggagcaaggcggcccccccgggtctggcagaccgc
accaacaagcctgcggtggggacgcggacgggccagcaggtcaaacgctccaggagcgac
gccaacttcagccctgtgaaggcaaaccccaataagaagcccatcctgtctctaccttca
cgtaagctgaataaagagcaggctgctgtcctcaaggctgtgctgggcggcaggagcgtc
ttcttcactggcagtgcaggcacaggaaagtccttcttgctgaagaggatcatggggtct
ctcccaccaaagagcacctttgcaacagccagcaccggagtggctgcctgtcacattgga
ggaacaactttgcacaattttgctggcatcggctcgggctctgcccctctggagcagtgc
atcgagctggcccagcggcccggcgtcctgcagcactggaccacctgcagacacctcatc
atcgacgaggtttccatggtggaggcccagttctttgacaaacttgaatcagtggcccga
tcagtcaggaggtccacgcagccgtttggaggcatccagctgatcgtatgtggggacttc
cttcaacttcctccagtttctaagggaaaggagaaggccagcttctgcttccaggccagg
agttggcggaaagtcatccaggtcaacatggagctgactgaagtgaggaggcaaacggac
cagaacttcatctccctcctgcaggcggtgagggtgggcagggtgacggaggaaatcacg
tcgaagctgatgaaaagtgcctaccacgaggtggagagggacggcatcgtagcgaccagg
ctgtgcacgcacaagactgatgtggaggtcaccaatgaggagagactccagcagctccca
ggagcggtgcgagtgtttgacgcggtggacagcgacccagagctgctgaagaccatagat
actcacagtcccgttggcagaaagatccatctaaaggttggagctcaggtcatgctgaca
aaaaacctggatgtagctcgaggtctggtgaacggcgcacgaggagtggttgtggctttt
cagtctgaaaaacacggactgccacgcgtgcgcttcctgtgcggcgtcacagaagtgctg
aagccggagcgctgggtcttcaagtctggtggtgggggacacttgagtcgacagcagctg
ccgctgaagctggcctgggccatctccatccacaagagccagggaatgaccctggactgt
gtagagatctctctggcgcgtgtgtttgaaagcggtcaggcgtatgtggcgctgtctcgg
gcccggagcttagagggtctcagggtcatggacttcgatccccatgtggtgcgagcagat
ccagatgttctcgtcttctacaagaagctgaggaaggagaggctgctcatgcaggcctcc
atggaggattttatcagcaacaatgacgatgcttaa
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