Cololabis saira (Pacific saury): 133452123
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Entry
133452123 CDS
T09849
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133452123
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Protocadherins
133452123
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
PRIMA1
Motif
Other DBs
NCBI-GeneID:
133452123
NCBI-ProteinID:
XP_061587317
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All DBs
Position
10:complement(44915107..44919884)
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AA seq
1009 aa
AA seq
DB search
MGGKGWRGLLVLVCVSLVCLAAVTQGKTVKYQTFEEDAPGTVIGNLAKDILSSSPSSLAG
SRNNFRMMKQFNSSFIRLRESDGQLSVGERIDRERVCKHTLHCLIAFDVVSFSKEQFKLI
HVEVEVKDINDNSPAFPRRDSSLEISENTAVGTRIPLDFAVDEDVGSNYIQSYQISVNSH
FSIDVLSRADGVKYAELVLMKELDRETQSSYALELAAVDGGEPARTGTTRIGVRVKDYND
NSPVFDRSGFTVELPEDAPVGSLLLDLDAQDPDEGLNGEVVYGFGNQVPAEIRALFRVDR
KTGRLTLESQVDFESKNTYEFDVQATDLGPNPSPAVCKIVVQVQDVNDNAPEISITPMTS
ITAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSSS
PLDRESIPEYNLTVVAEDLGSPPFRTITQYTVRLTDENDNAPAFGQRAYEVSVPENNAPG
AYITTVGARDPDLGPNGEVSYRLADSYFMGSPISTFVSLDPASGALYALRSFNFEVVKQL
ELRVTASDGGAPPLASSASVRVRVLDQNDNAPVITHPPVGGNGSTELPLPRDAPPGYVVT
RVEARDADEGVNAQLSYALAPTGGGPGDPPTFSVNPSTGEVYLNHALRHDVDETLRVMVT
VTDGGAPALTSTATLLLLLVEGPPPSGRSAHPPGGEPRAPPHWDLSVVIIVVLAGSCTLL
LLAIILIATSCNRRPHDKDGDDRESYGEKPMHGRPHPGGDNPLLPLHGPPAGGAYEGGFP
PAQPAGSDLCSASEDGSEVPCVYESDSSSKIRGKKHEGYSTLPGYGNGKEAVRPVTIWKG
NSYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDGAVVPPMGGQNALWACTSE
CKVLGHSDRCWSPSAVRANAAPSPAPTLSSFSSLPKTASLPRDPHRRDNYYQAQIPKTVG
LQSVYEKVLHREYDYVLVTPPRPVRVTEISDMAIPVYTPTPTHCPDDQA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaaggggtggcgcgggctgttagtgcttgtttgcgtctctctggtgtgtttg
gccgccgtcacgcaagggaagacggtgaaatatcagacgtttgaggaagacgcgccgggg
acggtgattggaaacttagccaaggacatcctctcctccagcccgtcctccctggcgggc
tccaggaacaatttccggatgatgaaacagttcaactcgtctttcatccgtctgcgggag
agcgacgggcagctgagcgtcggggagcggatcgaccgggagcgggtgtgcaaacacacc
ctgcactgcctcatcgccttcgacgtggtcagcttctccaaggagcagttcaagctcatc
cacgtggaggtggaggtcaaggacatcaacgacaactcccccgcgttcccccgcagggac
tccagcctggagatctcggagaacacggcggtggggacgcgcatcccgctggacttcgcc
gtggacgaggacgtggggagcaactacatccagagctaccagatctccgtcaactcccac
ttctccatcgacgtgctgagcagggcggacggggttaaatatgcggagctggtgctgatg
aaggagctggaccgggagacgcagtcctcttacgcgctggagctggcggccgtggacggc
ggggagccggcccgcaccggcaccacccgcatcggggtccgggtcaaggactacaacgac
aacagcccggtgttcgaccggagcggcttcacggtggagctgcccgaggacgcaccggtg
gggtccctgctgctggacctggacgcgcaggacccggacgagggtctgaacggggaggtg
gtgtacgggttcgggaaccaggtccctgcagagatacgcgcgctcttcagggtggacagg
aagaccgggcggctcaccctagagagccaggtggactttgagagtaagaacacgtacgaa
ttcgacgtccaagccacggatctgggtcccaacccgagcccggccgtgtgtaagatagtg
gtgcaggtgcaggacgtgaacgacaacgcgccggagatctccatcacccccatgacctcc
atcacggcgggcatcgcctacatcacggaggcggcggcccgggagagcttcgtggcgctg
gtcagcacctcggaccgggactccggggccaacgggcaggtgcactgcaccctgtacgga
cacgaccactttcgcctgcagcaggcctacgaggacagcttcatgatcgtcagctccagc
ccgctggaccgcgagagcatcccggagtacaacctgacggtggtggcggaggacctgggc
tcccccccgttccgcaccatcacccagtacaccgtgcgcctcaccgacgagaacgacaac
gcgccggcgttcggccagcgcgcctacgaggtgtcggtgccggagaacaacgcgcccggc
gcctacatcaccacggtgggggcccgggacccggacctgggccccaacggggaggtgagc
taccggctggcggactcctacttcatgggctcccccatctccaccttcgtgtccctggac
ccggccagcggcgcgctgtacgcgctgcgcagcttcaacttcgaggtggtgaagcagctg
gagctgcgcgtcaccgccagcgacgggggcgcgcccccgctggccagcagcgccagcgtg
cgcgtgcgcgtgctggaccagaacgacaacgcgccggtcatcacgcacccgcccgtgggc
ggcaacggctccacggagctgccgctgccgcgggacgcgccgcccgggtacgtggtgacc
cgggtggaggcgcgcgacgcggacgagggcgtgaacgcgcagctgtcctacgcgctggcc
cccactgggggggggcccggggacccccccaccttctccgtgaacccctccaccggggag
gtttacctgaaccatgcgctgcgccacgacgtggacgagactctgcgcgtaatggtgacg
gtgacggacggcggcgcgcccgcgctcacctccaccgccacgctgctgctgctgctggtg
gaggggcccccgcccagcggcaggagcgcgcacccgccggggggcgagccccgggcgccc
ccccactgggacctgtccgtggtgatcatcgtggtgctggcgggcagctgcacgctgctg
ctgctggccatcatcctcatcgccacgtcctgcaaccgccgcccccacgacaaggacggg
gacgaccgcgagtcctacggggagaagcccatgcacgggaggccccacccggggggggac
aacccgctgctgccgctgcacgggccccccgcagggggggcctacgagggggggttcccc
cccgcgcagcccgccggcagcgacctgtgctccgcgtccgaggacggcagcgaggtgccc
tgcgtgtacgagtcggacagcagcagcaagatccgggggaagaaacacgagggctactcc
accctgcccggctacgggaacggcaaggaggcggtgcggcccgtcaccatctggaagggc
aactcctacaccaccatctccgccagggaccccgccttcagcggcaaggacagcggcaag
ggggacagcgacttcaacgacagcgacagcgacgtcagcggagacaccggcctgaagaaa
gacggggccgtggttccccccatggggggccagaatgctctatgggcctgcaccagcgag
tgcaaggtcctgggccactcggaccgctgctggagtccctcggcggtcagggccaatgcg
gccccctccccggcccccaccctgtcctccttcagcagcctgcccaagacggcctccctc
ccgcgggacccccaccgcagggacaactactaccaggcccagatccccaagaccgtgggg
ctgcagagcgtctacgagaaggtgctgcaccgggagtacgactacgtgttggtcaccccc
cccaggcccgtcagggtgacggagatcagcgacatggccatccccgtctacacccccacg
cccacacactgtcccgacgaccaggcctag
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